Oncorhynchus nerka (sockeye salmon): 115123136
Help
Entry
115123136 CDS
T07952
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115123136
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
General mRNP proteins
115123136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
CDC45
RBD_DEAH11
RRM_7
Presenilin
Motif
Other DBs
NCBI-GeneID:
115123136
NCBI-ProteinID:
XP_029508316
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MRAGNKTQQQYFRTRVHFSQHIKCAIIMADDFDIEAMLEAPYRKDEIKSSSPNGHEERSK
KKKKSRSRSKDRKRSKSRDRKKSHDHKRSRSRERKRSRSKERRRSRTRSRERSGRYRDHK
TTFSGPKFNGGSRGKIGPPPVIKLSRRRSRSRSPFKKEKSPVRQPIDNLTPEERDARTVF
CMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQ
RLLGVPIIVQASQVMAEKNRAAAMANNLQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFG
RIESIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAGRPMKVGHVTERTDAST
ASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAIAIGAMAAVS
AAMNPAMNMNLNMNMNTAMNLPSQPLATHCFQLSNMFNPQSEDDPGWDVDIQHDVIEECN
KHGGVVHIYVDKNSTEGNVYVKCPTIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLF
PDSVTATQLLIPPARR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagagcggggaacaagacgcagcaacagtattttcgtactcgggtacatttttctcag
cacatcaagtgcgccatcatcatggctgatgactttgatatagaagcaatgcttgaggct
ccgtatagaaaggatgagatcaagtctagtagtcccaatggccatgaggagcgcagcaag
aagaaaaagaagagcaggagccgaagcaaagaccggaagagaagcaagagccgtgatcgc
aagaagagccatgaccacaagaggagccgcagccgcgagcgaaagcggagccgcagcaag
gagaggcgccggagccgcactcggagcagggagcgcagcggccgctacagggaccacaag
actaccttctctgggccgaaatttaacggtggttccagagggaagattggccctccacct
gtcatcaagctaagccgaaggcgttccagaagccgaagccctttcaagaaagagaagagt
cctgtgaggcagccaattgacaacctgactccagaggaaagggatgctcgcactgtgttt
tgcatgcagctggcagccagaatccgtccacgagacctggaagagttcttctctgcagtg
ggaaaagtgagagatgtgcgcatgatctctgacagaaattcgaggaggtcgaagggaata
gcttacattgagtttgtggaggccaactctgtgccgcttgctataggattgtctggtcag
cgacttctgggggtgccaatcattgttcaggcctcgcaggtaatggctgaaaaaaacagg
gctgctgccatggccaacaacctgcagaagggcaacgctggcccgatgaggctctacgtc
ggatccttacactttaacatcacagaggagatgctgagaggaatttttgagccttttgga
aggattgagagtattcagctcatgatggacagtgagactggaagatctaaaggatatggc
ttcatcactttctcggacgcagagtgtgccaagaaggccctggagcagttgaacgggttt
gagctggctggccggcccatgaaggtgggccatgtcacggagcgcacagatgcctccact
gccagttcattcctggacagcgacgagctggagaggacgggcattgacctaggcaccacc
gggcgcctgcagctcatggccagactggctgaaggcacgggactgcaaattcctccagct
gcacagcaagccctacagatgagtggggccattgctattggtgccatggctgctgtatca
gctgccatgaatcctgctatgaacatgaacctgaatatgaacatgaatacagctatgaac
ttgccatcccagccacttgctacacactgtttccagctgtctaacatgttcaaccctcag
tctgaagatgacccaggctgggatgttgacattcagcatgatgtcattgaggaatgcaac
aaacatggaggagttgtgcacatatacgtcgataagaattccactgaaggcaacgtgtat
gtgaagtgtccaaccattcctgctgccatggctgcagtaaacgcattacatggtcgatat
tttgcaggtaaaatgatcacagcggcatacgtccctctcccgacatatcacaaccttttt
cctgattctgtgacggctacccagctcctgatccctcctgctcgccgatga
DBGET
integrated database retrieval system
