Oncorhynchus nerka (sockeye salmon): 115123152
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Entry
115123152 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115123152
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115123152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
115123152
NCBI-ProteinID:
XP_029508340
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MAYPQGYLYQPSPSLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGTTAFTSASPG
YNSHLPYSAEAGAAATFASYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPXKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPSKPKDKGDSTDTESDHKLLNPGDIVCDRFKEENHGKET
DPLLSDSELKDQGDRTELLSESAKPTTSSPSAMPRGGTELVAQDKPSEMGHAPGTVNSNV
TSVIHSSPSAPKPKLWSLAEIATSSDRCKSSSDGPQGHGMGHSTVITTNAASPSRSSPQC
PLPNSTVLSRPIYYTSPFYPGYTNYGSFGHLHSHSNHGSGTGSTAHFNGLNQTVLNRAEA
LVRESQKGRGQTQVDLCKDSPYELKKGMSNI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccatccccttctttggcgctgtattcatgc
ccggcgtacagcaccagcgttatatcgggacccaggaccgaagaacttggtagatcttca
tctggctcagcttttgctccctatgccggaactaccgcgttcaccagcgcttcgcccggg
tacaactcccatctcccgtacagtgcggaggcaggagcggccgcgacattcgcttcatac
gtgagttctccctatgaccacacgacaggcatggctgggtctataggatatcacccctac
gctgctcccctgggttcatacccctacggtgacccggcataccgaaaaaacgcgacccgg
gatgctaccgccactcttaaagcctggttgaacgagcaccgtaagaacccctaccccnac
aagggcgagaaaatcatgctggccatcatcaccaaaatgaccctcacccaagtttccacc
tggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacctggactccccga
aaccggagcgaggacgaggaggaagacgagaacatcgatctggaaaagaatgacgacgac
gagcctagcaagccgaaagacaagggagactcgacagacacagagtcagatcataaattg
ctgaacccgggggacatagtgtgcgacagatttaaagaggagaatcatggcaaagaaacg
gatccccttctgagcgactcggaattaaaagaccaaggggatcggacagagttactgtcc
gagtctgctaaacccaccacctcgtctccatccgccatgcctcggggaggaacggagctc
gttgcgcaagacaagccgtcagaaatgggccatgcgccgggcacggtaaacagcaacgtg
acgtctgtcattcactcctccccatcggcccctaaacccaaactctggtccctggctgag
atcgcaacgtcttcagacaggtgtaagagcagcagcgacgggccgcagggccatgggatg
ggtcacagcacagtgatcaccaccaatgcagcgtcaccatcacggtcctccccacagtgc
cctctcccaaacagcacagtcctatccaggcctatctactacacgtcccctttttacccg
ggctacacgaactatggcagctttggacatcttcacagtcacagcaatcacggctcaggc
acgggctccacggcacatttcaatggattaaaccagactgtgttaaatagagcagaagct
ttggtaagagaaagccagaaaggcagaggccaaacgcaggtagatctttgtaaagactcc
ccttatgaactaaagaaaggtatgtcaaacatttaa
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