Oncorhynchus nerka (sockeye salmon): 115123172
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Entry
115123172 CDS
T07952
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115123172
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
Others
115123172
Endosome - Golgi transport
115123172
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
115123172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Laminin_G_3
Neurobeachin
Motif
Other DBs
NCBI-GeneID:
115123172
NCBI-ProteinID:
XP_029508361
LinkDB
All DBs
Position
Unknown
AA seq
1584 aa
AA seq
DB search
MNFIIQEKDSIVCMVELLDKCEPTCQAEVWSIFTAILKKSLRNLQACTDTALINLVLDRV
AHTDSMIADLMVDMLGVLASYSITVKELKLFFSKLQGEKGQWPPHAVKLLSVLRSMAHRN
GPDSFFSFPGKSAAAIALPPIAKWPYQSGFTFHTWLRMDPINNINVDKDKPYLYCFRTNK
GLGYSAHFVAGCLIVTSLKSKGTFQHCVKYDFKPQKWYMVTIVHVYNRWKNSEISCYVNG
ELASYGEITWFVNTSDTFDKCFLGSSETADAKRMFCGQMGAVYLFGEALSAAQILAIYQL
GPGYKGTFKYKAESDHLFAEHHKTLLYDGKLSSGISFSYNPRATDAQLCLESSPKDNASI
FIHSPHALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDHLQHTSDELDTSVCCTLL
SFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRSVLDIVLAFARYLSNLQNGV
LLLKQLCDHILFNPAIWIHAPAKVQLVLYTYLSTEFISTVTIYNAIRRVGTVLQVMHTLK
YYYWVVNPQDRSGVTPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDYGVKEDELQSILN
YLLTMHEDDNLLDVLQLLVALMSEHHGSMVQAFDQRNGVRAIYKLLASNSEGIRVQALKV
LGYFLKHLPAKRKSEVMLGHGLFSLLNERLMLHSNQFSMTTYNVLFEILTEQICTQVIHK
QHADPDSNVKIVNPQVLKVIAALLKNSPLSPESMEVRRVFLSDMIKLFNNSKDNRRSLLQ
CSVWQDWMLSLCFINPKSSEEQKVTEMVYAIFRILLYHAIKYEWGGWRVWVDTLSITHSK
VTFEQHKENLARMFRQYQRLGSEGDAAGIRTISGASRDSEILGQLRTNRDQGEETAPSTV
IELTIDPEGVPQNQESPNTTPPSATSASASTPSPPEREGDRSQRGQAPITVSNMLARAEE
EEEEELQQVQNQISEDQRGGAGDRAEATPQETEAKLTRDKVSSKTVEAMAETETATDKTD
EAAAASTAEIDEATRPETEDAKVAKTETSDDAKTSDTDKVVRPQTDGEKGSETHSCKASH
VLMSEDSLNEPKEPELAKQPEEQVSAAISACQQGSVAEGSAVGASVQSVSDQVRPSSTDD
SMEESSFVSAAGGEEEEKEEEEVKTEEVVVEEEKMEEVKAEEIKTEVKTEKEKEEKSVAK
VTKSAVESQATPPASVPEESRTQPPKMEEIDLDPSAPGTDPTSTEPARQPLESTISPPTA
LEAILPPAAVGATVSKSDTSQAVAPAEAPSTKAVQPEAPQASGATEAPSSRTETSPKVAT
ATAVEAGKDSAAEGPGSATKTKEIHIARLDVSSVASDTERLALKETSTPEVPQGDAAAAG
ASGGQASESSSSARSTMFRIPEFRWSHMHQRLLTDLLFSIETDVQMWRSHSTKTVMDFVN
SSENVVFVHNTVHLISQVVDNLIMSCGGILPLLSAATSSSHDLENIEPSQGLSVEASVTF
LQRLINLVDVLIFASSLNFTEIEAEKNMSSGGILRQSLRLVCAMAVRNCLECQQQSHFKP
SQDSARGQQAVHSLMGASKSMPAQ
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcattatccaggagaaggacagcattgtgtgcatggtggagctgctggacaag
tgtgagcccacgtgccaggcggaggtgtggagtatcttcacggctatcctgaagaagagc
ttgaggaacctgcaggcctgcaccgacacggccctcatcaacctggtcctggaccgcgtg
gcccacactgacagcatgatcgcagacctgatggtggacatgctaggagtgctggccagc
tacagcatcacagtcaaggagctgaagttgttcttcagcaaactgcaaggagagaaaggc
caatggcctccccatgcggtgaagctgctgtctgtcctgaggagcatggcccaccggaac
ggacctgactccttcttcagcttcccaggcaagagtgctgctgctatagctctgccccct
atagccaaatggccgtaccagagtggattcaccttccacacgtggctccgcatggatcca
atcaacaacatcaatgttgacaaggacaagccttacctgtactgttttcgcaccaacaaa
ggtctgggatactctgcacactttgtggccggctgtttgattgtaacctcgttaaagtcc
aaggggactttccagcactgtgtgaaatatgacttcaaaccacagaagtggtacatggtg
accatcgttcacgtctacaaccgctggaagaacagtgagatcagctgctacgtcaatgga
gagctcgcctcctacggagaaatcacctggttcgtcaacaccagcgacacttttgacaag
tgtttcctgggttcgtcagagacggcggacgccaaacgtatgttctgtggtcagatgggg
gcggtgtatctgtttggcgaggccctcagtgcagcccagatcctggccatctaccagctg
gggcctggttacaagggcacgttcaagtacaaggctgagagtgaccacctgtttgctgag
caccacaagaccctactgtatgacggcaagctgtcctctggcatctccttctcctacaac
ccccgcgccaccgatgctcagctgtgcctggagtcctcccccaaggacaatgcctccatt
ttcatccactcgccacatgcactcatgctgcaggatgtgaaggctgtggtgacccactcg
gtccagagtgccatccactccatcgggggagtgcaggtcctcttccccctgtttgcacag
ctggatcacctccagcacaccagcgatgaactggacacctctgtctgttgcactttgctg
tcctttgtgatggagctgctgaagaactctgtggctatgcaagagcaggtcctggcctgc
aagggcttcctggtcatcggttacaccctggagaagtcttccaaggtgcatgtgactcgg
tccgtgctggacatcgtgctggccttcgcccgttacctcagcaacctgcagaacggcgtc
ctgctgctcaagcagctgtgtgaccacatcctgttcaaccctgccatctggatccatgcc
cctgccaaggtgcagttggtgttgtacacctacctgtccaccgagttcatcagcacggtg
accatctacaacgccatccgcagggtgggcacggtactgcaggtcatgcacacgctcaag
tactactattgggtcgtcaacccccaggaccgcagcggagtcacgcccaagggcctcgac
ggtccgagacccaatcagaaggagatccactctctcagagcctttctgctgctgtttgtg
aaacaactcataatgaaggattacggagtgaaggaagatgagcttcagagtattctcaac
tacctgctcaccatgcatgaggacgacaatctactggatgtgcttcagctgctggtggct
ctgatgtcggagcatcacggctccatggtgcaggcctttgatcagcgcaacggagtacgg
gccatttacaagctactggcttccaacagtgaaggaatcagagttcaggcactcaaagtc
ttgggctacttcctcaaacacttgcccgctaagaggaagtcagaggtcatgctgggtcac
gggctcttctccctgctcaacgagcgactgatgctccactccaaccagttcagcatgaca
acctacaacgtgctcttcgagatcctgaccgagcagatctgcactcaagtgatccataaa
cagcatgcggaccccgactccaatgtgaagattgtcaacccgcaggtcctgaaggtgatc
gctgccctgctgaagaactctcccctctccccagagagcatggaggtgcgcagggtcttc
ctgtcagacatgatcaaactgttcaataacagcaaagataaccggaggagcctgctgcag
tgctcggtgtggcaggattggatgctctctctgtgcttcatcaaccccaagagcagcgag
gagcaaaaggtcactgagatggtgtacgccatcttccgcatcctgctctaccacgccatc
aagtacgagtggggcggctggcgcgtgtgggtggacaccctgtccatcacccactccaag
gtgacctttgagcagcacaaggagaacctggcccgtatgttccgtcagtaccagagactg
ggctccgagggcgatgcagctggtatccggaccatttccggggccagccgagactctgag
attctgggccagctccggaccaacagggatcagggggaggagactgccccctccaccgtg
atcgagctcaccattgacccagagggggtcccccagaaccaggagtcccccaacactacc
cctccctcagcaacctcagcatctgcttccacccccagccctccagagagagaaggagat
agaagtcagaggggtcaagcacccataactgtgtccaacatgctggccagagctgaagaa
gaggaggaggaggaactacagcaggtccagaatcagatctctgaggatcagagaggaggt
gctggtgacagagctgaagctactccacaggagactgaagctaaacttactagggataaa
gtcagcagtaagactgttgaggccatggctgagactgagacagccacagataagactgat
gaagctgcagcagctagcacagctgaaatagacgaagcgaccaggccagaaactgaagac
gcaaaggtggctaagaccgaaacaagcgacgatgctaaaacatctgataccgacaaagta
gtaagacctcaaacggatggagagaaggggtcagaaacgcacagctgcaaagcctcccac
gttcttatgtctgaagattccctgaacgaacccaaggaaccggaactggcaaagcaaccg
gaggaacaggtctctgctgccatctcggcctgccagcagggcagcgtggcggaggggtca
gcggtcggggcatctgtccagtcagtcagtgaccaggtccgacccagctccaccgacgac
agcatggaggaatcctcttttgtctccgccgctggtggagaggaggaagaaaaggaggaa
gaggaggtgaaaacagaggaggttgttgttgaggaggagaagatggaagaggttaaagca
gaggagatcaagacagaggttaaaactgaaaaggagaaggaagagaagagtgttgccaag
gtcacaaagtcagcagtggaaagtcaagccacaccacctgcttctgtacctgaggagagt
cggacacaaccccctaaaatggaggagattgaccttgacccgtctgcaccaggcaccgac
cccaccagcacagagccagcacggcagcctttagagtccacaatatcgccccctacagcc
ttggaggccatactaccaccagcagcagtcggggccacagtttctaaatctgacacctca
caggctgtagcaccagcagaggcccccagcaccaaggcggtccagccagaagccccacag
gcctcaggggccacagaggcccccagcagcaggactgaaacctctccgaaagtagccact
gctactgctgtggaggcagggaaagacagtgctgcagagggccctggctctgccaccaag
accaaagagatccacattgccaggctggatgtgtccagtgtggcctcagacacagagaga
ctggcgctaaaggagacctccacacctgaagttcctcagggcgacgcggctgcagccggt
gcctcaggaggccaggccagcgagagcagctcctccgctcgctccaccatgttccgtatt
ccagagttccgttggtctcacatgcaccagcgcctgctcacagacctgctcttctccatc
gagactgacgtgcagatgtggaggagtcactccactaagacggtgatggactttgtgaac
agcagtgagaatgtggtgtttgtccacaacacagtgcacctcatctctcaggtggtggac
aacctcatcatgtcctgtggaggcatcctgcccctgctttctgctgccacatcctcctca
catgatctggagaacattgagccgtcccagggtctgtcggtggaggcctctgtcaccttc
ctgcagcgcctcatcaacctggtggatgttctgatcttcgcctcctccctcaacttcact
gagatcgaggctgagaagaacatgtcctctggcggtatcctcagacagagcctccgtctg
gtgtgtgccatggctgtgaggaactgtctggaatgtcagcagcagtctcacttcaagccc
agccaggacagcgcccgcggccagcaagcagtgcacagcctcatgggagcttccaagtcc
atgcccgcgcag
DBGET
integrated database retrieval system
