Oncorhynchus nerka (sockeye salmon): 115123205
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Entry
115123205 CDS
T07952
Name
(RefSeq) homeobox-containing protein 1-like
KO
K24885
homeobox-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115123205
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115123205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HlyD_D4
HTH_3
AbiJ_NTD3
Motif
Other DBs
NCBI-GeneID:
115123205
NCBI-ProteinID:
XP_029508394
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MRQWCLPAAAPRTEPLPTGRLSPPLSDARMECCEVEPRYTIEQIDLLQRLRLSGMTKPQI
IQALASLERLDPDHRPPYCNDTHTANPTTNTTPTTASAPAPSSSSSSSSLSLASVTTQTP
GLDGASLSPSNSYETSPPPLYPPAVGVQRSFSYDIMAEEDWDLEEKVEEYMRRDSNLVKE
EIKTFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRSFYRWYLLEKNNPGLR
WSESQHGPAGLGLGLSGLGQGLGQNLGSGPRAARGGDRDVTATGNAATGTTATTAVTAST
TWGRQRELLMHLLPWYTAASSQPGATLSMRSLVKEEPDWRTGVSPGERGGMIGGPLRLRR
GSRFTWRKECQSIMESFFMENQYPDEAKREEIANACNSVIQKPGGKLSEFERVTALKVYN
WFANRRKEMKRRANIVPHATPSVARHTECRTPHRVSHATPSVARHTECRAPHRVPHATPS
PPRHTESPTPHRSVNQRFSEQEEISSRKDLDQQDPSLAAVNVLPPPSPAPQVLEHKADES
KRETVDEE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgcctcccggctgcggcaccgcgaaccgagcctctgcccacagggcgc
ctctcacccccgctgtcagatgccaggatggagtgttgtgaggtggagccacgctatacc
atcgagcagatcgacctccttcagcgtctccgtctctcagggatgaccaagccacagatc
atccaggctttagcatccctagagcggctagatcccgaccatcgccccccgtactgcaat
gacacccacaccgccaaccccacaaccaacactacccctaccacagcctccgccccagcc
ccctcctcctcctcctcctcttcctccctctccttggcctccgtcaccacgcagacaccc
gggctggatggcgcctccctgtcgcctagcaacagctacgaaacctcgcccccgccgctg
taccccccagcagtcggagttcagaggtcattcagctatgacatcatggcggaggaggac
tgggacctggaggagaaggtagaggagtacatgaggagggacagtaacctggtgaaggag
gagattaaaaccttcctcaacaaccgcaggatctcccaggccatcgtgggacaggtcaca
ggtatcagtcagagttacatctcccagtggctgctgcagcaaggcttggagatgagcgac
tccaaacgcagatctttctaccgctggtacctgctagagaagaacaacccagggctgagg
tggagtgaaagccagcatggcccggcgggtctgggcctggggctcagtggtctcggccag
gggctgggccaaaacctgggctctggccccagggcagccaggggaggggacagagacgtc
acggcgacgggcaacgccgccacgggcaccacggccactacagccgtgaccgcctccacc
acctggggcagacagagagaactgctgatgcacctgctgccatggtacactgcagcctcc
tcacagccaggtgctaccctgtcgatgcgctccctggtgaaggaggagcctgattggagg
acgggggtcagccccggggagaggggcgggatgattggcggtcctcttaggctgcggagg
ggaagcaggttcacctggaggaaggagtgccagtccatcatggagagtttcttcatggag
aaccagtaccctgacgaggcaaagagagaggagatcgctaacgcctgtaactcagtcatc
cagaaacccggaggcaagctgtctgagtttgagcgtgtcacggctctgaaggtgtacaac
tggttcgccaaccgccggaaagagatgaagaggcgggctaatatagtcccccacgccaca
ccgagtgtcgcacgccacaccgagtgtcgcacgccacaccgagtctcccacgccacaccg
agtgtcgcacgccacaccgagtgtcgcgcgccacaccgagtcccgcacgccacaccgagt
cccccacgccacaccgagtctcccacgccacaccgatcagtgaatcaacgattctcagag
caggaagagatttcatccaggaaggaccttgatcaacaagacccctcattggctgccgtc
aatgtccttccccctcctagccccgcccctcaggtcctggaacacaaagctgacgaatcg
aaaagggagactgtggatgaggagtga
DBGET
integrated database retrieval system
