Oncorhynchus nerka (sockeye salmon): 115123419
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Entry
115123419 CDS
T07952
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115123419
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
115123419
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115123419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
115123419
NCBI-ProteinID:
XP_029508619
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKESIEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEDDSDSQWEQEEDEGQEGGENNKG
KKLLIEGDGDDDDLVDDYGALEDSSEGEGEVDGDGEELLPIERAARKQKKLQEAMGQESD
DDDDDDDDDKGKSGDEDMDENDTVQANLDEMDKFILPGAEEIAKEGVLLVDLQTIHQRIK
DNVDVLSHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEAN
EIQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAG
HYMLQGASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKS
VVGNIHRLGVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDI
QRLAHLQKELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGL
DFGKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEET
KPSEAVEVTADSSDEDGPSKAGSKNKSKKQKPVPGKPAVSQKATANGKPAKSIGKKTTNP
STLKKSGKTTGPKKAKIAKMDGGTVKVDGELKKSNTVKTEGETTKELKEGSRFEKKGDKQ
RKSPMQSKKRMGKNKFNKLKKLLKKEEVGQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctagccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaagcattgagaaggaggagccaaaaaaaggattcacagatgaaaatagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggccaatcagataatgaggacgacagt
gacagccaatgggagcaggaagaggacgagggacaagagggaggggagaacaataaaggg
aaaaaactgctaattgaaggagatggtgacgatgatgacctggttgatgactacggtgca
ttggaggacagcagtgaaggagagggagaagtagacggtgatggagaggagctgctcccc
atcgagcgagctgccaggaagcagaagaagctgcaggaagccatgggccaggagagtgat
gacgacgacgacgacgatgatgatgataaggggaagagtggagatgaagacatggatgaa
aatgacactgtacaggctaatttagatgagatggacaaattcattctacctggagcagag
gaaatagcaaaagagggtgttttgcttgtagacctgcagaccatccaccagagaataaag
gacaacgtggatgttctctctcactttgcaaccaagagagaggaggggaaagagagaaca
gagtacctctctctcctcaaaaaggatctttccacttactacagctacaacaatttcctc
atagacaaactgctggatatcttcccagtgtcagagctgattgatttcctggaggccaat
gaaattcagcgacctgtcaccattcggaccaatacactgaagacaaggaggagggacttg
gctcaggccctgatcaacagaggggtgaatctggatcctctggggaagtggtctaaagtg
ggcctggtcatctttgactcctcggtacccatcggtgcgaccccagagtacctagctggt
cactacatgctgcagggagcctccagcttcctgcctgtcatggctctctctccccaggag
ggggagactgtgctcgacatgagctcagctcccggggggaagaccacctatatggcccag
ttgatgaggaacacaggagtgattgtggccaatgatgccagtgctgacagactgaagagt
gtggtgggcaacatccaccgtctgggagtcaccaactcaatgatctgtaactacgacgga
aggcagttccctaaggtcatgggggggtttgacagagtgctgcttgatgctccctgctca
ggcacaggagtaatctccaaagaccctgctgtgaagaccagtaaagacgagtctgacatc
cagcggttggcccacctgcagaaggagctcatcctggcggccatcgactcggtcaacgct
gagtctccctctggaggctatctggtgtactgcacatgctctatcatggtggaggagaac
gagtgggtagtggactacgctctcaagaaaagaaacgtcaaacttgtccagactggactg
gactttggcaaagaaggcttcaccagattcaaagagagacgattccatccctctctgaaa
ctctcacgccggttctatcctcattcccacaacatggacggtttctttgtggccaagctg
aaaaagttctccaacacggtcccaaccacagcagttgacaaagacggagaagaggaaacc
aagccatctgaggcagtagaggttacagctgattcctctgatgaggacgggccatctaaa
gcagggtctaagaacaagtccaagaagcagaagccagtccctggcaagccagctgtgtca
cagaaggccacagccaacgggaagccagccaaaagcatcggcaagaaaacaacaaaccca
agcaccttgaaaaagagtgggaaaacaaccgggccgaaaaaggcaaagatcgctaagatg
gatggtgggactgtgaaagtggacggagagctcaagaagtccaacacagtcaaaacagaa
ggggagacgaccaaagaattaaaggaagggagcaggtttgagaaaaagggcgataaacag
aggaaatcccccatgcagagcaagaagagaatggggaagaacaaattcaataagttgaag
aagctgctgaaaaaagaagaggttggacaatga
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