Oncorhynchus nerka (sockeye salmon): 115123489
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Entry
115123489 CDS
T07952
Name
(RefSeq) splicing factor, arginine/serine-rich 15-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115123489
03041 Spliceosome [BR:
one03041
]
115123489
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115123489
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
115123489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115123489
NCBI-ProteinID:
XP_029508699
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MDSVNAFNLELFSMIDMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVYGPRFQKNFTPTFQNLYLCPHDDKSKIIRVLNLWQKN
AVFEMDVVQPLLDMAAGSLAPTPSPQEDLQAQPQVPSASIASVQTPVSSASIAAALPQVS
RASIAAALPQLPPQLQNPEALAAVAQLFQSGQGHELQKILQRFQPGQQTPPVVPNTMADQ
NHPHVVQGQHNTHHPPLNTHQTHPTEQKNSLAKKLLDRFDYDDEPEEVKREEMNPLVPGN
QYDGHFPGPMQPNMEQQFQGQPGRQQTPVGGYPGLNKGYSQSQHTDQGNSREREDPSGRR
EGRQRGHGRRSRSRSGSRSPRRKRSPGSPSRKPRHSSQRSGSRSRESRWNSPRSRSQERK
EREKDKDRRQKGLPSIKSQTLSVCTTTLWVGQLDKKTSQQDVMCLLEEFGQIDSINMIPP
RGCAYIVMVHRQDAYRALHKLGRGSFKVNQKAIKIAWALNKGIKAPHKKFWDVERGVTYI
PWSKVKMEELEGSREGGMLDADTLCPEWGDDVKELTKPGGLNNGGGVDAMETEGAATAHV
QVPPVQPIGSVGGPPGPPTPSLTPSGPPSFLPTDFNPTQMPPGFPPPVVGGPRSTKDDSG
SKDKAGGSGSLSGPSDAPDSQLGAPGPGAVMSPPGPAVLLGPRMPMMTMQPRSGLPPPQL
QPPFAPHLPPPNMPPMMMGSRGPNPMFPPRGGPPGGFRMPMGHQSMEDFPHGPPRHPFQP
GPPRHPFQPGPPGEEGGNWEGGRHFRGERPGFGGHDRDWGRFGEQVRGFPRGGRGGGWSR
GGPEGRDRFMNRQDRFDR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggattccgtcaacgctttcaacttggagttattctccatgattgacatgaagcctcca
atatcacgagcaaagatgatgtcagtcactaaatcagcaataaaggctatcaagctatac
aagcatgtcgtccagattgtggagaagttcatcaagaagtgtaagccagaactgaaggtt
cctggtttatacgtggtggattccatagtccgacagtcccgacatcagtttggagtggat
aaggacgtctatggacccaggttccaaaagaacttcaccccgacattccagaacctctac
ctctgtccacatgatgacaagagtaagatcatccgtgttctcaacctgtggcaaaagaac
gctgtgtttgagatggacgtcgtccagcccctgttggacatggctgctggatccttagcc
cctactccatccccccaggaggacctccaggctcagccccaggtgcccagtgcctctata
gcatcagtccagacaccagtctctagtgcctccatagcagcagccctgccccaagtctcc
agggcctccatagcagcagccctaccccagctccccccacagctccagaaccctgaggcc
ctggctgccgtggcacagcttttccagtctggacagggacatgagcttcagaagatcctc
cagaggttccagccagggcaacagactccccctgtggttccaaacaccatggctgaccag
aaccacccacatgtggtccaaggccagcataatacacaccacccaccgttgaacacacac
cagacacatcctacggagcagaagaactcactagctaagaaactcctggaccgttttgat
tatgacgacgaaccagaagaagtgaagagagaggagatgaatccccttgttccagggaac
cagtacgacggccattttcctggtccgatgcagcccaacatggagcaacagtttcagggc
cagcctgggagacagcagacacctgttggaggataccctggtctgaacaagggctacagc
cagagccagcacactgaccagggaaactccagagaaagagaagatccgtctgggaggagg
gaggggaggcagcggggtcacggcaggaggtcacgctccaggtctggctctcgttctccc
aggagaaagaggtcccccggttctccctcccggaaaccccgacattcctcccagcgctcc
gggtcccgttccagggagagtcgctggaactcgcctcgctcccgctcgcaggagaggaag
gagagagagaaggacaaagaccgtagacagaaaggtctgcccagcatcaagagccagaca
ctcagtgtttgcaccacgactctgtgggtgggccagttagacaagaagacttctcagcag
gacgtcatgtgtttactagaggagtttgggcagatagactccatcaatatgatacctcct
cgtggatgtgcctacatagtgatggtccacaggcaggatgcctacagagctctacacaaa
ctcggcagaggatccttcaaggtcaaccagaaggctatcaagattgcgtgggccttgaac
aagggtataaaggcgccccataagaagttctgggatgtagagcgaggcgtcacctacatc
ccctggagcaaggtgaagatggaggagctggaggggtccagggagggaggcatgctggac
gcagacacactctgtccagagtggggagatgacgtgaaggagctgactaaaccaggagga
ctgaacaacggaggaggagtggatgccatggagacagagggagctgccaccgcccatgta
caggtgcctccagtccagccaatagggtctgtgggtggtccccctggccccccaaccccc
tctctcacccccagtggacccccttccttcctgcccactgacttcaaccccacacagatg
cctccaggtttccctccaccggtggtgggaggaccaaggagcaccaaagatgactcgggg
tctaaagacaaggctggagggagtggtagcctctctggcccctcagacgctccagacagc
cagctgggagctccagggccaggggccgtgatgagtcctccaggtccagcagtgttactg
ggtcccaggatgcccatgatgaccatgcagcctcgttcaggactaccaccccctcaactc
cagcccccttttgcccctcacctccctccccccaacatgcccccaatgatgatgggctcc
aggggccccaaccccatgtttccccccagggggggccctccaggtgggttcaggatgccc
atgggccaccagtccatggaggactttcctcacggaccccccagacatcccttccagcct
ggaccccccagacatcccttccagcccggaccccccggggaagaaggtggcaactgggag
ggcgggagacacttcaggggtgagaggccagggttcgggggacatgacagggattggggg
aggtttggggagcaggtgagagggtttccgagaggaggaagaggagggggttggtccaga
ggtgggcctgaggggagagaccgcttcatgaatcgacaggatagatttgaccggtga
DBGET
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