Oncorhynchus nerka (sockeye salmon): 115123533
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Entry
115123533 CDS
T07952
Name
(RefSeq) hamartin-like
KO
K07206
tuberous sclerosis 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04140
Autophagy - animal
one04150
mTOR signaling pathway
one04218
Cellular senescence
one04910
Insulin signaling pathway
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
115123533
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115123533
09143 Cell growth and death
04218 Cellular senescence
115123533
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
115123533
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115123533
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
CCC_C_2nd_pro
Motif
Other DBs
NCBI-GeneID:
115123533
NCBI-ProteinID:
XP_029508742
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Position
LG4:21932778..21967614
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AA seq
1273 aa
AA seq
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MAREQPNVGDLLPLLESSDIRQLEEIKGLINEHLSTERGSMLLNGLVDYFLETNSAQAMH
ILSSVREPHDKHLLDKMNECMTKQACRLPTLTLLGHVVRKQPSWIHKIVRYPLLLSLLKC
LKTDSDVVVLITGVLVLITLLPMIPQAGKQHLYEFFDIFGRLASWNLKNPGHVSEVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENMDTFEEVVKPMLEHVRIHPELVTGTKD
HELDPTRWKRFEIHDIVIECAKVSLDPKEASCEEGYATMPENLYPQMQLCPQDSASSPYT
DFHSSFGSSSLTPFSTPRQPLPPPLSLPPLSGTQSSYRSPQTSRRQNSSCEFNSTCGGKE
LWSPSSQCGMATPPSSRGMSPNPELSHCASYLSGHRVHSTSGGKGTPASSTPATTSPPPT
LSEFPTIPLTSNTASPPRKHGCPVEASKPSLVRQEPIPDPEKGGEVINNRDASGGGTISM
TLTELSVFMQEQELELQLRTEKEREEAAITEELLEITEDKRDFAALRGFDTPFYRTTETL
TGTQEKALPNHPLGGLMLPRDPHHAVSTPDKALENAQCANGGGDNSRGSALEQSWSFQPM
CPFSPIEHPLHRSPSAPEYEMAKFGGLFSPSPFIKNHSLPYEALFDLALPRAASLFVGRR
TSEALGRAALERLCQRQEGLEDREEEGQGRVSASPLEVLDRLVQQGSDAHDKVLNRLPLP
SKSADWTHFGGSAPLDELHTLRSQLLLLHSQLLYERYKREQHAVRNRRLLRRVINATALE
EQNNAMKDQLNLQSVDIVSLKESLQVEQQRCRQLWDDRETVVTRLHSQVRQLQQGRDDYY
TKNQELQSQLNEYQKKMNELEADLQRSNNKVCHTGHLLNQMITKLSSSERTQQQMSFLNK
QLLLLGEAHKLTEQRQQHTGSDNAMEAQMVQVSWGKEVERLRQSLLQQGQKLEAAQQRVG
ELETQLTKKEHLIVEQKKFLEDVKGRAKGELQASDSRYQAQRRVTQLLQTELLQLYSRLE
MEGHAALTTPSAGGSSTDPGPPIDSSIMEPDGPVTSGTNEWSGNGRPPQSPRRNGSTLSP
GQPMANNPPKKPPVNSVNGTQEVPKPLLVEPSCTHTPLAPPLPPDATPLTVGSYPSAKSF
LGMRARELFRNKSESQCDEEPPPPRLAGLSQGLKTELCVEPSFPPLGNSLTCPVSNPVLN
LTFSPALASILGAPLTVPVKEHLPETKQRATKQESTRRKMGGARGGGVVVASSARPRQQL
RIMDYNETHHKHS
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggccagagagcagcccaacgttggggacctcctccctctcctggagtcctctgacata
cgccaactggaggagatcaaaggccttataaatgagcacctcagcaccgagcgagggtca
atgctgctgaatggactggtggactacttcttggagactaactcggcccaggccatgcat
atcctctcgtcagtcagagagccacatgataagcacctgctggacaagatgaacgagtgt
atgaccaaacaggcctgccggctgcccaccctcactctgcttggccacgtagtccgcaag
cagccgtcctggatccataagatcgtccgctacccgctgctgctctcgctgctcaaatgc
ctcaagacggattcagacgttgtggtcctcataactggagtcctggtgttgatcactctg
ctacccatgatcccccaggctggcaaacaacacctgtatgagttctttgacatctttgga
cgcctggcttcctggaacctgaagaacccaggccacgtctccgaggtatacctcatccac
ctgcacgccagcgtctactcgctcttccaccgcctctacggcatgtacccctgcaacttt
gtgtcctacctgcgctcccactacagcatgaaggagaacatggacacatttgaggaagtg
gtgaagccaatgctggaacacgtccgtatacacccggaactagtgactggaactaaggac
catgagcttgatcccaccagatggaagagatttgagatccatgacatcgtcattgaatgc
gccaaagtgtctctggatcccaaggaagcgtcgtgtgaggagggctatgcgaccatgccc
gagaacctctacccccagatgcagctttgtccacaagactcagcctctagcccctacaca
gacttccacagcagcttcggaagctcctctttgacccccttctctaccccacgccagccc
ctaccaccacccctgtccctgccccctctgtcagggactcagtcctcctatcgtagcccc
cagacctccagacgtcagaactctagctgtgaattcaactctacctgtgggggaaaagaa
ctgtggagtccctcctcccagtgtggaatggccacacccccttcctccaggggcatgtca
cctaacccagagctctcccattgtgcctcttacctctcaggccaccgtgtccacagcaca
tcaggagggaaaggaacacctgcctcaagtacacctgccaccacctccccgccccccacc
ctctctgagttccccaccatccccctgacatccaacaccgctagtccaccacggaagcat
ggctgccctgtagaagcatccaaacctagcctggtgaggcaagaaccaatcccagatcct
gagaaaggtggagaggttatcaacaacagagatgcaagtggtggtgggaccatttccatg
acgctgacagaactttcagtctttatgcaggagcaggagctggagcttcagctgaggaca
gagaaagagagggaagaggctgccatcacagaggagctcctggagatcacggaggacaag
cgagactttgctgccctgaggggctttgacacccctttctaccgcaccactgagaccctg
acaggtacccaggagaaggccctgcccaaccacccactgggtggcctcatgctgccccgg
gacccccaccatgcggtgtccaccccagacaaggcactggagaatgcccagtgcgctaat
ggtggtggggacaatagtaggggctcggccctagagcagtcctggtctttccaacccatg
tgtcccttcagccccatcgaacacccactccaccggagcccctctgccccggagtacgag
atggccaagttcggtggcctgttctcccccagccccttcatcaagaaccactccctgccc
tatgaggccctgtttgatctggctctgccccgggccgcatccctcttcgtggggaggagg
acatcagaggccctgggcagggctgctctcgagaggctgtgccagcggcaggaggggctg
gaggacagggaggaggagggtcaggggagggtgtctgcttcccccctggaggtgctggat
cgtctcgttcagcagggaagcgacgcccacgacaaggtgctcaacagattacctttgcca
agcaagtcagctgactggacgcattttggaggctcggctccgctggacgagctgcacacg
ttgcgtagccagctgctcctgctgcatagccagctgctgtacgaacgctacaagcgagag
cagcacgccgtccgcaaccgacgcctactgcgacgcgtcatcaacgccaccgcactggag
gaacagaacaacgccatgaaggaccagctgaacctccagagtgtggacattgtctctctg
aaggagagtctgcaggtggagcagcagcgctgcagacagctgtgggacgaccgagagacc
gtggtcaccagactacacagccaggtccgccagctacaacagggccgggacgactactac
accaagaaccaggaactacagagtcagttgaatgagtatcagaagaagatgaatgagctg
gaggcagatctgcagaggtccaacaacaaggtgtgtcacacggggcaccttctcaaccag
atgattaccaagctgagcagcagtgagcgcacccagcagcaaatgagcttcctgaacaag
cagctgctgctcctgggggaggcccacaagctgactgaacagcggcagcagcacacaggc
tcggacaatgccatggaggcccagatggtgcaggtgtcctgggggaaggaggtggagagg
ctgaggcagagcctgctgcagcagggccagaagctggaggcagcgcagcagagggtgggc
gagctggagacacagctcaccaagaaggaacacctcatcgtggagcagaagaagtttctg
gaggacgtcaagggccgggccaagggcgagctgcaggcgtcagacagcaggtaccaggcc
cagaggagagtgacccagctcctgcagacggagctgctgcagctctacagtagactggaa
atggagggtcatgccgccctgaccacaccctccgcagggggcagcagtaccgatcctggc
cctcctatagactctagtatcatggagccagatggacccgtcacatcaggaaccaatgag
tggtcaggtaacggcagaccacctcagtccccacgacgcaacggcagcactttatctcca
gggcaacctatggcgaacaacccccctaagaagcctcctgtcaactcggtcaacggcacc
caggaagtccccaagcctctccttgtggagccttcctgtacccatacccccctggccccc
ccactgccccctgacgccacccccctcactgttggctcctaccccagcgccaagagcttc
ctgggcatgcgggcgcgagagctgttccggaacaagagcgagagccagtgtgacgaggag
ccgccacccccccgcctggccggcctttcacagggcctgaagactgagctgtgtgtggag
ccctcatttcccccactggggaattctctgacgtgtcctgtctctaaccctgtccttaac
cttaccttttcccctgcccttgcctctatactaggtgcccctctcactgtgcccgtgaag
gagcacctgcctgaaaccaagcagagagctaccaagcaggagagtaccagacggaagatg
ggaggagcaaggggagggggagtggtggtggccagttcagcacgacctagacagcaacta
aggatcatggactacaacgaaacgcatcacaagcacagttaa
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integrated database retrieval system