Oncorhynchus nerka (sockeye salmon): 115123672
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Entry
115123672 CDS
T07952
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115123672 (zfr)
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115123672 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
115123672
NCBI-ProteinID:
XP_029508883
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGGAAQYSQQPAAGVAYTHPTTVASYTV
HQAPMAAHSVAAAYAPTGATVAVARPAPVAVAAAATAAAYGGYQAAHATADYGYARQPDV
PPPPPPVTSQNYQDSYSYVRSTAPAVTYDPKQYYQQPVASSAVAAAVAVQPQPTAESYYQ
AASLNTSWDTTWKKSLPAPKTGYSQTSLTPYTQTQQSRQVTAIKPVTPSPASSTFSIYPV
STVQPVASVVPSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASTYYQQQQQQQKQAVAAV
AASAAWTGSSFTKKPPFQSKQMKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKK
KEVALKVSQSSSSSSGGGGSSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLH
TKLGKPIPSTEPSVVTQTSTASSKTPVSSSTTPTGSTSNSSYLKPVNIVSQGGAGAGLGK
GLVGNNLSATNATTAVKKVNTPKINFVGGSKLQTTGKVETSKPPPPSLVPQPQETKNESS
DSLSTLAALQNDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRL
QYKKKVNPELQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRYGGDYWAV
RMEDQHHWDERRGGPRMPGDGPYLQGTPGPPGLLGVRPGMPIPQPQGPVPPRRPDSSDDR
YVMTKHATIYPSEDELQAIQKIVSITERALKLVSDIIIDQDKTKETTGEDKDTKEVPKTP
QDRALKGVMRVGVLAKGLLLCGDNNVNLVLLCSEKPTKNLLSRIVEHLPKQLTVVTPEKY
EVKGSMENCSIILTAEADPKMTVTITLTSPSIREEEETPTTPPPRDGDVTLVKDPEDVLD
RLKCLAALAALRHAKWFQARANGLQSCVIVIRILRDLCQRVPTWSAFPSWAMELLVEKTI
SSASGPLSPGDALRRVFECISSGILLPGGPGLVDPCEKNPTDTLTAMEEQHREDITSSAQ
FALRLLAFRQIHKVLGMDPLPQMKPRFNVCTNRKRRRDNSDGTDGFEGEGKKDKKDFDSS
C
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccagtggtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaactactttggatttacccacggtggtgctgcacagtacagt
cagcagccagctgcgggggtggcctacacccaccctaccaccgtggccagctacaccgta
caccaggcaccgatggcggcccactccgtggcagcagcctatgctcccaccggcgccaca
gtcgccgtagccaggcctgcccctgtcgccgtggcagcagcagccactgccgcagcctac
ggagggtaccaggcggcgcacgccaccgcagactacggctacgcacgccagccggacgtc
cccccgccgcccccccctgtcacgtcccagaactaccaggactcctactcctacgtacgg
tccacggcaccagcggtaacctacgaccccaagcagtactaccagcaacccgtagctagc
tctgcggtagccgctgcggtggccgtacagccccaacccacagccgagtcctactaccag
gccgcctcccttaacacctcctgggacaccacgtggaagaaatccctaccagcccctaag
acaggctacagccagaccagtctgactccctacacccagacgcaacagtctcgtcaggtg
acggccatcaagcctgtcactccctccccagcttcctccacattctccatttacccagtg
tccaccgtacagcctgtggcctccgtcgtcccctcctactctcagagccccacctactcc
accaacgcggtcacgtactctggtacgtcgtactcgggctacgaggctgcggtgtactct
gctgcctctacgtactaccagcaacaacagcagcagcagaaacaggcggtggcggctgta
gcagcttcagcagcctggacaggcagctccttcaccaagaagcctcccttccagagcaag
cagatgaaacccaagcagccccccaaaccaccacagatccactactgtgatgtctgcaag
atcagctgcgcaggaccccagacctacaaggagcacctggagggccagaagcacaagaag
aaggaggtggccctgaaagtatcccagagcagcagcagcagtagtggaggtggaggaagc
tcagcccgggggactcagaaccagctccgctgtgagctctgtgacgtctcctgcaccggg
gcagatgcatacgctgcacacatccgaggagccaagcaccagaaggtggtgaagctccac
accaagctggggaagcccatcccttccacagaaccaagtgtagtgacccaaacctccacg
gcctcctccaagactcctgtctcctcctctaccacccctacaggatccacctccaactcc
tcctacctgaagccggttaacatcgtgagccagggtggtgcgggggccggactggggaag
ggtctagtggggaacaacctatcagcaaccaatgccaccacagctgtcaagaaggtcaac
acccccaagatcaactttgtcgggggaagcaagctccagactaccgggaaggtggagaca
tccaagcctcctccgccctcattggtcccccaacctcaggagacaaagaacgagtcctct
gattcgctgtctaccctggccgccttgcagaatgacgtgcagcccgttggacacgactat
gtggaagaggtgcgtaacgacgaaggcaaggtgatccggttccactgtaagctgtgtgaa
tgtagcttcaacgatcccaacgccaaagagatgcatctgaagggcaggagacaccgcctg
cagtacaagaaaaaggtgaacccggagctacaggtggaggtgaagccctctatcagagcc
aggaagatccaggaagagaagatgaggaaacagatgcagaaggaggagtactggaggagg
agagaggaagaggagagatggaggatggagatgaggtacggaggagattactgggcggtc
cgtatggaggaccagcaccactgggacgagagacgtgggggccccaggatgccaggggac
ggaccatacctccaggggacccctggcccgcctggtctactgggggttcggcctggcatg
cccatccctcagccacagggacctgtgcctccccgtcggccggactcatcagacgaccgt
tacgtgatgactaagcacgcgaccatctacccctctgaggacgagctgcaggccatccag
aagatcgtctctatcacagagagagccctcaaactggtctcggacatcatcatcgaccag
gacaagaccaaggagactactggggaggacaaggatacaaaagaggttcccaagactccc
caagaccgagctctgaagggggtgatgagggtgggggtcctggctaaaggactgctgctc
tgtggagacaacaatgtcaacctggtcctgctttgctcagagaaacccaccaagaacctg
ctaagccgcatagtggagcatctccccaagcagctgacggtggtgaccccagagaagtac
gaggtgaagggttccatggagaactgttctatcatcctgacggcagaagccgaccccaaa
atgacagtcaccatcaccctgacctcacccagcatccgagaggaggaggagacccctacc
acacccccgccacgggacggagatgtaaccttggtgaaagacccagaggacgtcttggac
aggctaaaatgccttgccgctctggcggctctgcggcacgctaagtggttccaggctaga
gcgaacggactccagtcctgcgtgattgttattcgtatcctgcgtgacctctgtcagagg
gtccccacatggtccgccttccccagctgggccatggagctgctggtagagaagaccatt
agcagtgcctctggccccctgagcccaggcgatgcactgagacgagtctttgaatgtatt
tcctctgggattctgctccccggtggccccggattggtcgacccgtgtgagaagaacccc
actgataccctgacagccatggaggagcaacacagagaggacatcacctcaagtgcccag
tttgctctgcggctgctagccttccgtcagatccacaaggtgctgggcatggacccactg
ccccagatgaaacctcgcttcaacgtctgcaccaaccgcaagcgtcgccgtgacaacagc
gacggaacggacggattcgagggtgaagggaagaaggacaagaaggatttcgacagcagc
tgctag
DBGET
integrated database retrieval system
