Oncorhynchus nerka (sockeye salmon): 115123786
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Entry
115123786 CDS
T07952
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
one04261
Adrenergic signaling in cardiomyocytes
one04382
Cornified envelope formation
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115123786
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115123786
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115123786
09158 Development and regeneration
04382 Cornified envelope formation
115123786
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115123786
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115123786
03036 Chromosome and associated proteins [BR:
one03036
]
115123786
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115123786
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115123786
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115123786
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115123786
NCBI-ProteinID:
XP_029509007
LinkDB
All DBs
Position
LG4:complement(23193051..23205975)
Genome browser
AA seq
448 aa
AA seq
DB search
MAGAGGGSNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEI
ENKSQPQCRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYIDPNTVTALRVPVFRPMDLMVEASPRRVFANAHTYH
INSISINSDHETYLSADDLRINLWHQEITDRSFNIVDIKPANMEELTEVITAAEFHPHQC
NTFVYSSSKGTIRLCDMRASALCDTHSKLFEEPEDPSNRSFFSEIISSISDVKFSHNGRY
MMTRDYLSVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYHNFFRMFDRGQRRDVTLEASREGSKPQQVLKPRKVCADGKRKKDEISVDSLDFNKKI
LHTAWHPQDNVIAVATTNNLYIFQDKVN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctggaggtgggagcaatgacgtgcagtggtgcttctcacaggtgaagggg
gccattgatgacgacgttgccgaagccgacatcatatctactgtggagttcaaccactca
ggggagctgctagccacaggagacaagggtggcagggtagtcatctttcagcaggaaata
gagaataagagtcagccacagtgtcgtagtgagtacaatgtttacagtactttccagagc
catgagcccgagtttgactacttgaagagtttagagatcgaggagaagatcaacaaaatc
cgctggctgccccagaagaacgcagctcagttcctgttgtccacaaacgacaaaaccata
aagttgtggaagatcagtgaacgagacaagcgaccagagggctacaacctgaaagaggag
gatggacgctacatagaccccaacactgtcactgcacttcgagtgcctgtgtttagaccc
atggacctcatggtggaggcgagccctcgcagggtgtttgccaatgcgcacacctaccac
atcaactccatctccataaacagtgaccatgagacgtatctatccgcagacgacctgcgc
atcaatctctggcaccaggagatcacagaccgcagcttcaacattgtggatataaagcca
gccaacatggaggagctgacagaggtgattacagcagctgagttccatccacaccagtgc
aatacctttgtctacagcagcagcaagggcaccatccgcctctgtgacatgagggcatct
gcactatgtgacacgcactccaaattgtttgaagagccggaggaccccagtaaccgctcc
ttcttctctgagataatctcttccatctcagacgtcaagttcagccacaacgggcgctac
atgatgacccgggactacctgtctgtcaagatttgggacctgaacatggagagcaggccc
gtggagacgtaccaggttcacgagtacctcaggagtaagctgtgctcgctctatgaaaac
gactgcattttcgacaagtttgagtgctgctggaacggaaatgacagtgtggtgatgacg
ggctcataccacaacttcttccggatgtttgaccggggccagaggcgggacgtgaccctg
gaggcatcccgggagggcagtaagccacagcaggtcctgaagccccgcaaggtgtgtgcc
gacgggaagcggaagaaggatgagatcagtgtagacagcctggacttcaacaagaaaatc
ctccacactgcctggcaccctcaggacaacgtcatcgctgtggcaaccaccaacaacctc
tacatattccaggacaaagtgaactag
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