Oncorhynchus nerka (sockeye salmon): 115124260
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Entry
115124260 CDS
T07952
Name
(RefSeq) FERM and PDZ domain-containing protein 3-like isoform X1
KO
K23959
FERM and PDZ domain-containing protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115124260
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
FERM domain-containing proteins
115124260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
FERM_C_FAK1
FERM_F2
Motif
Other DBs
NCBI-GeneID:
115124260
NCBI-ProteinID:
XP_029509521
LinkDB
All DBs
Position
Unknown
AA seq
1615 aa
AA seq
DB search
MLKDDSLLLIPNVLKVFLENGQIKSFTFDSRTTVRDVISSLQDRLSLRYIEHFALVLESG
GLDQNQRLHLLQENQPLSHVVHRTYFQGMKCLFRICFFPKDPADLLRRDPAAFEYLYIQS
RNDVIKERFGMDWKSDVTLRLAALHIYITVSSARPNQKISLKNVEKEWGLEPFLPLTLLP
TIKEKNVCKTLSQLLKTYQHPPPSGNKVPPLQGKLQYMRVLNDLPPFGGLLFHTVGLDEK
QSATTLLVGPRHGIGHVIDLKNNLTTVLTEFSRVAKIQLHRENQGVARVEVAIHEAKPLV
LLMEWPDASNFACLISGYYKLFVDPKRAIYYRTPGQSYMIKADYRGSHHAHPRSGVTAVP
SGDRRGDERERSHTRDPGSQSQKTATAPLPAESQHLGLCHVHLREPQQLQELQMQAEPEL
DINENFISQEVPERPSAKSEPIPRSTETIGERAENPVQESSVVFRSRAQTMGQSQRATRF
FCDSCKARLRAEGVALDGGSSGSSSKHCSSACASRDAGAVDLMALPPPGNEEEEEEEVEE
VGRKLQPPPPAIADPPPGFRDNSSDEDDSKRARKSQPNPNSIPSPSTTTGATAGKSSAKE
VVPAPEDVPVTLIDNVATRTVRDHAQELDDALVSTLQALEALAASEDFPHHPQQPAQTTG
LIVLAAITPESSLDSGHETNSSELTDVSEMVSAMKQHQNQAYLLAHHINKERIFSRRDFP
LAIPGCTTQTIEGGAFSMGQIRGSCPSKPVTLCKTVPLKLSPAKETASPGLSSVKQGSNV
TQDPSQSEPSEGKKAKSEPTKACTQDRPAKSPEELKVSDPGQAPKVGKDQRSPCSAVGKL
SPNLSAGIKEKKSAPLSPDPTNKALPILLAVDRTASAKICPTNMCQDAETASSETIKPSS
SNDLLPVDDLFCTCPVREPGPQLRPKDPQSQKVVVFHSSSPTDDERLRAKGLQLASSKEN
AARAAGGAGADPVLVKPSPQVPTKFSQTPHIPVKAERKEAAEAKAERSQGKAQAEPQKCP
SKTLSLLGDSTHPTCSVDKVSTFPSADSKKQGGGKGKAQRSAPFLSIKNLLSATFPARIR
RETDERRAQLQKVRQYELEFLEELLKPKSSGGEYLPQGSSPVPSGTPCACQLRTSPVLKA
PGISREQRRSCDCKRMCRGIRLPDTPVGSTAEPQQHRGRERSLSKTPPATSKTPHSQGSQ
RRPQTLEIKTTRIRSTSLESREPRGEQASCLPTCTSRTPDCMGAPQYKKLQRRYSIGEVD
NAEGTPLYAEVKPKAKSLEKEMERVRATGLRLPTPVVPIPNQTQTHTAAAAAKGKKGVFF
VQGEELLRESKEGAPTEMLLGLPSEDSDDREKCCSFCFCYRKCEEADESSEKEELSYSIP
LQVLPGMQLDSQTLPVISKTLQVLHAEGCSGEEEEIEEEEEEEEPQTQEIDLRACGTLEG
SLARVQSLQGQTFSLPDGFLNAQLDANELLAILRQCANVPQVDNESRLQPSRIAEYKQEL
AVRFKEFRAACRRVASVEKSPTRMLSVVTASFLVLCELTQTFIKLVRGVRSEAQRLQLLR
KVEEVAINYTLLLRAAEDAMGHSSSLPNKSVSPLVTTTTTNMGSLSRPMKTLPAQ
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaggacgactctttgctactcataccaaatgtgctgaaggtgttcctggagaat
ggtcagatcaagtcctttacgtttgacagccgcaccactgtcagggatgtgatctcgtcc
ctgcaggaccgcctgtccctgcgttacatcgagcactttgccttggtgctggagtcaggt
gggctggaccagaaccagagactacacctgctgcaggagaaccagccactctcacatgtg
gtgcacaggacgtatttccaggggatgaagtgtctcttccgcatctgtttcttccccaag
gacccggcagacctgctcaggagggaccctgcagccttcgagtacctctacatacagagt
cgcaatgacgtcatcaaagagcgcttcggcatggactggaagtctgatgtcacactgcgg
ctggcggcgcttcatatctacatcacagtgtcgtcggccagacccaatcagaagatctcc
ctcaagaatgtggagaaggagtggggtctggaacccttcctacccctcactctgcttccc
accatcaaggagaagaatgtgtgtaagaccctgtcacagctgctcaaaacctatcagcat
ccgcctccctccggcaataaggtccctcctctccagggaaagctgcagtacatgcgtgtg
ctcaacgatcttcctccatttggaggcttgctgttccacaccgtcggactagatgagaag
cagtcggccactacgctgctggtgggtccgcggcacggcatcggtcatgtgatcgaccta
aagaacaacctgaccacggttctgacagagttcagtcgcgttgctaagatacagctgcac
cgggagaaccagggcgttgcccgcgtagaggtggccatacatgaggccaagcctctggtc
ctgttgatggagtggcctgatgccagtaacttcgcctgtctcatctccggctactacaag
ctgttcgtggaccccaaacgagccatctactaccggacacctggtcagtcttatatgatc
aaggcagattacagaggttcccaccacgcccacccacgctctggcgtcacagcggtgccc
agtggagaccgacgaggggatgagagggaaagatcccatacgagggacccaggttcccag
tctcagaagacagcgaccgccccactgcccgcagagtcccaacacctgggtctatgccac
gtccatctccgggagccacaacagctgcaggagctccaaatgcaggcagaacccgagctc
gacatcaatgagaacttcatttcccaagaggtaccagagcggcccagtgccaagtctgag
ccaatcccccggagcacggagacgatcggtgagagggcagagaaccccgtccaggagagc
tcagtggtcttcaggagcagagcccaaaccatggggcagtcccagcgagctacacggttc
ttctgtgactcctgcaaggccaggttgagggcagagggagtggccttagacggtggaagc
agcggcagctcgtcgaagcactgctccagcgcctgtgcctcccgtgatgctggtgcagta
gacctcatggccctgcctccgccggggaacgaagaggaagaggaagaagaggtggaggaa
gtaggaagaaagctgcagcctcctccgccagccattgctgaccctccgcctggcttcagg
gacaacagctcggatgaagacgactccaagagagcacggaagtctcaaccaaacccaaac
tccatccccagtccaagcactacaactggggcaactgcaggcaagagctctgccaaggaa
gtggtaccggctccagaggatgtcccggtgacgttgatagacaacgtggccaccaggaca
gtacgggaccatgcccaggagctggatgatgctctggtgtccactctgcaggccctggag
gccctagctgcatcagaggatttcccccatcacccccaacagccagctcagaccacaggg
ttgatcgtgttggcggccattacgcctgagtcatcgttggactcagggcacgagaccaac
tcctctgagctgacagatgtctcagagatggtgtcggccatgaagcagcaccagaaccag
gcctacctgttggcccaccatatcaacaaggagcgtatcttcagtcgcagggacttcccc
ttggccataccaggctgcaccacccagactatagagggtggtgcgttctccatgggtcag
atccggggcagctgcccctcgaagccagtgaccctctgtaagactgttcccctaaagctc
agccctgctaaggagactgccagtccaggtctcagctcagtgaagcaggggagtaacgtt
acccaagacccatcgcagagtgaaccgagtgaaggcaagaaggcaaaatcagagcctacc
aaagcgtgcacccaagaccgtcctgcaaagtcacctgaggagctgaaagtgtccgatcca
gggcaggcacccaaggtcggcaaggatcaaaggtcaccctgttctgctgtgggaaaatta
agccccaatctctctgcagggatcaaggaaaagaagtctgcgcctctgagtccggaccct
accaacaaagccttacctattctattggctgtagacagaactgcctccgccaagatttgc
cccacaaacatgtgccaagatgccgagactgcctctagcgagaccatcaagccttcaagc
tctaatgacctcctgccagttgatgacctattctgcacgtgcccagtgagagaacccggg
ccacagctaagaccgaaggatccacaatcccagaaggtggtggtgttccattcctcatcc
ccaacagacgatgagcgtcttcgggccaaaggcctccaactggctagcagcaaagagaac
gcagcgagagcagcaggaggagcaggagcagaccccgtcttggtcaagcccagcccccag
gttccaacaaagttctcccagaccccacacatacctgtgaaagctgagaggaaggaagca
gcagaggccaaggcagagaggtcccagggtaaagctcaagctgagccacagaaatgcccc
tcgaagacattatctctcctgggagactccacacaccctacctgctctgtggacaaggtc
tccacttttccatctgccgacagcaagaagcagggtggtggtaaagggaaggcccagcgt
agtgcccccttcctcagtatcaagaacctcctgtcagccacgttcccagctcggattcgt
cgggagactgacgagcgcagagcccagctccagaaggtccggcagtacgagttagagttc
ctggaagaacttctgaagcccaagtcatccgggggagagtacctaccccaggggtcctcg
ccagtcccctcaggcaccccctgtgcttgccagctccgtacaagtcctgtgctaaaagcc
cctggcatctcccgagagcaacgccgcagctgcgactgcaagaggatgtgcagaggcatc
cgactgcctgatacaccggtcggctcaactgcggagccacagcagcatagaggcagagag
agatccctctccaagacccctccagcgacctccaaaacccctcactcccagggaagtcag
aggagacctcagaccttagagatcaaaaccacccgaatccgctcgaccagtctggagtca
cgggaacccaggggggagcaggcttcctgcttgcccacctgcacctctcgcacaccagac
tgcatgggcgctccgcagtacaagaagctccagaggcggtatagcatcggggaggtggac
aacgctgaaggcacgccactgtacgccgaggtcaaacccaaagccaagagcctggagaag
gagatggagcgagtgagggccacaggactgaggcttccaacgcccgtggtgcctattccc
aatcaaactcaaactcacacggctgctgcagcggcgaaggggaagaaaggagtgttcttc
gtccagggagaagagctgctgcgggagagcaaagagggggcgccgactgagatgctgctg
gggctgcctagcgaggacagtgatgacagggagaagtgctgctccttctgtttctgctac
aggaaatgtgaggaggcggacgagagcagtgagaaagaagagctttcctactccatcccc
ctccaggtcctgcctgggatgcagctggactctcagaccttgcccgtcatcagcaaaacc
ctccaggttctccacgctgagggctgcagcggggaggaggaagaaatagaggaagaggaa
gaagaagaggaaccgcagacacaggagattgacctccgggcctgcgggactctggagggt
agcctggcgagggtccagtccctgcaagggcaaacgttcagcctgccggacggtttcctc
aacgcccagctggatgctaatgagctgctagccatcctgcgacagtgcgctaacgttccc
caggtggataacgaatcacgcctccagccgtcccggatcgccgagtacaaacaggagctg
gcggtgcgcttcaaggagttcagggccgcgtgcagacgggtggcgagcgtcgagaagagc
cccacgcgcatgctgagcgttgttacggccagcttcctggtcctctgcgaactgactcag
actttcatcaagctggttagaggggtgcgttcagaggcccaaaggctgcagctgctacgg
aaggttgaagaggttgctatcaattacactttgttgttgcgtgcagccgaggatgctatg
ggccactccagtagtctgcctaacaagagcgtgagtcccctagttactacaaccaccact
aacatgggctccctctctcgcccaatgaaaaccctgcccgcccagtag
DBGET
integrated database retrieval system
