Oncorhynchus nerka (sockeye salmon): 115124365
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Entry
115124365 CDS
T07952
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115124365
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115124365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_14
LRR_EndoS
LRR_6
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
115124365
NCBI-ProteinID:
XP_029509641
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MFRGFSLGFCLTLFCFGPFVCSACPSQCNCFFHKLSDGSKARSVLCNDPQITLIPPNFPA
DTSKLRIEKTAITKISSETFHYLDSLEFLWVSFNSLNSLNVDSFRGLRSLDELRLEGNAL
TSFPWESLTDMPNLRLLDLHNNKISSIPAEATIYIKNLTYLDLSSNNLATVPPEVLSMWL
SVKQSQEDGDSSKYILGLHDNPWLCDCRLYDLVQFQKSPSSSVVLIDTKLRCADPESLSG
VLFSETELQRCQEPRVHTAVARVRSSLGNNVLLRCGTIGVPVPELSWTRADGKQMNGTVQ
EEVSKEGIIWSILSVPAVSYRDSGKYMCKATNFVGTADAIISLVITDSFKNEEQGGSSKT
RNQRGRKTGGFGKAAYQKKLVARYIPPPTTTAAMPIIEPLGPSGFTGRYDIESYSIVDSV
ADGQTPGPPATEPAIIKEVEKEVLSNLAANASSLQASAPPERRVVRSVKVIGDTDHTVSL
NWRAPTAKNTTEFSVLYAVFGERDMRRINVAAGKNRITIDGLVPRTKYIACVCVKGLIPK
KEQCVIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLGRKSKD
IQDSYVTFETLSPGQKPKGMEGEYLARQHPDESNRLLSARSSVDSGATCRNEGPPSEYFC
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaggttttagcctgggtttctgcttgacattattttgcttcggaccgtttgtt
tgcagcgcgtgtccgtctcaatgtaactgcttctttcacaaattatcagacggatccaaa
gcaaggagtgtcctttgcaatgacccacagatcacactgatcccacccaactttcccgca
gacacctcgaaactgcggatcgagaagactgccatcacaaagatctccagcgaaaccttt
cactacctcgacagtttggaatttctctgggtgtctttcaattctctcaactctttgaat
gtagacagcttccgtggcctgagaagtctggatgagctgagactggaagggaacgctctc
acctctttcccctgggaatctctgactgatatgcccaacctgaggctactggacctacat
aataataagatatcgtcgatcccggccgaggcgaccatttatatcaagaacctgacttac
ctggacttatctagcaacaacctggccaccgtacctcctgaggttctctctatgtggtta
tctgtgaaacagtctcaagaagatggggacagttccaaatatattctaggtctccatgac
aacccatggctatgtgactgccggctctatgacctggtccagttccagaagtctccgtcg
tcctctgtggttctgatcgacaccaagctgcgctgtgctgacccggagagcctgtcgggg
gtgctgttcagcgagacggagctccagaggtgccaggagccccgtgtccacacggctgtg
gcccgggtcaggagctccctggggaacaacgtcctgctacgttgtgggactatcggagtc
ccagtaccagagctgtcctggacccgggcagacggcaaacagatgaacggcactgttcag
gaagaagtttcaaaggagggaataatttggtccatcctgagtgtgcctgccgtctcttac
cgggactctgggaaatacatgtgcaaagcgaccaacttcgtggggactgcagatgccatc
atctccctggttattacagactcctttaaaaatgaggaacaaggtggcagctccaagact
agaaaccaaagaggacggaaaaccggtggatttgggaaagctgcctatcagaagaaactt
gttgccagatacatacctccaccaaccacgacggcagctatgcccatcatcgagccacta
ggaccgagtggtttcacagggaggtatgatatcgagagctacagtattgtggacagtgtg
gccgatggacagacgcccggtcctcctgccacggagccggcgattattaaggaagtggag
aaggaggttcttagcaacctggcagccaacgcctcttctttgcaggcatcggcgccgccg
gagagacgggtggtacgatcggtgaaggtcatcggggacacagatcacaccgtctccctg
aactggcgggccccgacggccaagaacaccaccgagttcagcgtcctgtacgccgtgttc
ggcgagagggacatgcggaggattaacgtcgctgcgggaaagaaccgtatcaccatcgac
ggtcttgtgccaaggacaaagtacatcgcctgcgtctgcgtcaaaggcctgatccctaaa
aaggagcagtgtgtaatcttctcaacggacgaggcggcaagcgcaagcggcacccagaag
ctcattaacgtggtggtgatcaccgtggcctgcgtgatcgctgtccccctgacactgatt
gtctgctgtggggcgctcaagaagcgctgtaaaaagctactggggaggaaatccaaagat
attcaagactcatatgtaacattcgagaccctctccccgggacagaagcctaaggggatg
gagggggagtaccttgccaggcaacacccagacgagtccaacagactgctctctgctagg
tccagtgtggactctggggctacttgtaggaatgagggaccccctagtgagtacttttgt
tga
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