Oncorhynchus nerka (sockeye salmon): 115124379
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Entry
115124379 CDS
T07952
Symbol
nisch
Name
(RefSeq) nischarin
KO
K24095
nischarin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115124379 (nisch)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
115124379 (nisch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
LRR_14
Motif
Other DBs
NCBI-GeneID:
115124379
NCBI-ProteinID:
XP_029509658
LinkDB
All DBs
Position
Unknown
AA seq
1536 aa
AA seq
DB search
MDTAVFPEDVVVKKVSIVGSELVENYTVYVIEVKVRDHRWTIKHRYSDFHDLHEKLTSEK
KIEKHLLPPKKMIGKNSKSLVEKRQKELEVYLQTLLVRFPTAAPKVLSYFLHFHQYEMNG
ITAALAEELFHKGEQLLVAGELFTLCPLQLYAITQQLKLAKPTCSNGDAKADLGHILDFT
CRLKYLKITGTRGEVGTSNIQEDSLTFDLSVFKALLQIEISDCNSAQIMGLPSLKPCLVT
LNVHHSATSMMDVLVPEACVSPQWVAEGALTDRPVATIIPTWKRLTTLDMSHNHIGCIDN
SVKLIPKVEFLDLSSNELSMVENLQHLYNLIHLDLSYNILTVLEGAHTKLGNIKTLNLAG
NQLDSLAGLTKLYSLVNLDLSSNKLGQLEEIRYIGTLPCLERLVLSNNPMCIIPDYRTKV
LAQFWDRASEVWTHTHTNNTEACWCVCQISEDSRLSGGGSPISSSVAAASSSSSSLLSSA
LAPACSSQELICKEEGFVTPTILTPVDFIALDTQRCYDDVNTLPCEEQLQVTSHQPDADS
SSFQHSRTQQNQNSSCCCCVEDREERYTWSNTNLRTPVLPLHLPSTSSCPSFTSLLSARI
TRALGEENRRPSRLRDLPSQEETDLGSPSPSPSPSYGDGYFEMGLGEGKEREGEEEGSLT
DPVEGENQPPETEVLRVTKVMWCHCIRVDDDVVEQRSVCVVLTNSLLGLFHCLQHPSTAP
THQPQSQPHDLGSVTVQTQGLTLQTLVDNLEPDLVLPYDQLDSLLFYIPDTCLSLRVRSS
DVHWYLFSDPEGLKETHSLLCSLAQLPSSPSGGPSTPQQLLFTSWETEENQSCVKGGYAA
HLVETAMLSSQTSQRTTSSTNPTLTPTKTSTNPDTFTLQTLTNPLLSDVLSHVAPGGDRD
SSCCVPCVLFLTQRHLCVLKVDFKALARGTTGDEPSDDHNQRLRSCSRLSRVPLASVLPH
PRPSALYGAGAGSIPAYSPSCPWHHRSPRDSRVLELLVGQERVTAVFPLPHDRLRFQKQF
TLLRSSLRDIKTVAFLQGGNEHSHSDWDSPRTINIHTSTPNETKSTDRLQVNRCLKGMVF
ACDVYEMFKGDGLCVCFDQEEKEELHHILWSSVVFYKSPDVEATSCIMLSTKALYFLLDD
SASTLNDQSLLWDWSHCDHRDPELIMSYCFTIDLHDLHSVNVGLFDQYFRVMGPSADHII
CCLTRDSYGTHRFLQQLMTVLSLQDKLPSPEPSEQDFYTQFGNKSTGKMGNYELVHSSRV
KFIYPSEEEIGDLTFIVAERKGPSGVSSCNILLYVLVFQVQTQGLGFSQTQGLGFSQAQG
LGFSQAPAADRQTSTGGLQGDRKSHLHPQSPVSASQPRLHPYPQAPGPAPSTRPHIPQQS
LPPQAPSTPRPVLHPKTLILTSTDVFLLDEDYISYPLPDFAKEPPPRDKYQLADARRIRD
LDRVLMGYQTYPQALTLVFDDVPGPDLLCQLTMDHFGEEEVGGGGGEKGRRCGRTESEVL
WCIYVPGADSRERLICLLARQWEVLCSRELPVELTG
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggatactgccgtatttcccgaggatgtcgttgtaaaaaaggtttccatcgttggatcg
gagctcgtagagaattacactgtgtacgtcattgaggtgaaagtacgggatcacagatgg
accataaagcatcgctacagtgatttccatgacttgcatgagaaactgacatctgagaag
aagatagagaaacatttactgccgcctaagaagatgatcggtaaaaactccaaaagcctg
gtagagaaacgtcagaaggaactggaagtctacctgcaaacactgctggtcagattccct
acagctgcccctaaagtcctctcctactttctgcacttccaccaatatgaaatgaatgga
atcacagccgctctggcagaggagctgttccacaagggagagcagttgctggtggctggt
gagctgttcacattgtgtcccctccagctgtatgccatcactcagcagctgaagctggcc
aagcctacctgctctaatggtgatgccaaggcagacctgggacacatcctggacttcacc
tgcagactcaaatacctcaagatcacaggcaccagaggagaggtggggaccagtaacatc
caggaagacagcctcacgtttgacctttcagtctttaaagcgctcctacagatagagata
agtgactgtaactcggcccagatcatgggactgccttctctgaaaccctgtctggtcacg
ctgaatgtccaccactctgcaacatccatgatggatgtgctggttccggaggcatgcgtg
tcccctcagtgggtcgcagagggagcgcttacagaccggcccgtcgccaccatcatccct
acctggaagagactcaccaccctggacatgagccacaaccacataggctgcatagacaac
tcagtgaaattgataccaaaagtcgaattcttagatcttagttccaacgagctctctatg
gtggaaaaccttcagcacctgtacaatctgatccacctggacctttcttacaacattctg
acagtgttagagggggcccacaccaaactgggtaacatcaagaccctcaacctggcaggc
aaccagctcgacagcctcgcaggcctcactaaactatactctctggttaacctggacctc
agctccaacaaactgggacagcttgaggagatcaggtacataggaacgctgccctgcctg
gagaggctggtcctgtctaacaaccccatgtgtatcatccctgactacagaaccaaggtg
ctggctcagttctgggaccgcgcctcagaggtatggacacacacacacacaaacaatacg
gaagcctgctggtgtgtttgtcagatcagtgaggactccaggctgtctggtggtggatct
cccatctcctcctctgtcgctgccgcctcttcctcctcttcctctctcctctcctcagcc
ctagccccagcctgctccagccaagaattgatatgtaaagaagaaggcttcgttacccct
acaatattgactcctgtggattttattgcacttgatacccagcgatgctatgatgatgta
aacacactgccttgtgaggaacaactacaggttaccagccaccaacctgatgctgattct
agttcttttcaacactccaggacccaacagaaccagaacagtagctgctgctgctgtgtg
gaggacagagaggagcgatacacatggagcaacactaacctgaggacccctgtgctcccc
ctccacctcccctccacctcctcctgtccatccttcacctccctgctgtctgcccgcatc
accagagccctgggagaggagaacaggaggcccagcagactccgagatctccccagccag
gaagagactgatctgggcagccccagccccagtcccagcccctcctatggagatggatac
tttgagatgggtctgggggagggaaaggagagggagggagaggaggaggggtccctgact
gacccggtagagggagagaaccagcccccagagacagaggtgttacgtgtgaccaaagtc
atgtggtgccactgcatcagggttgatgatgatgtggtggagcagaggtcggtgtgtgtg
gtgctaacaaacagtctactggggctgttccactgtcttcaacacccctccacagcccca
acccatcaaccccagagccagcctcacgaccttggctcagtcacagtccagacccagggc
ctaaccctgcaaactctagtagataacctggagccagacctcgtccttccctacgaccag
ctagactctctcctcttctacatcccagacacttgtctttccctgagggtgaggtcctct
gatgtccactggtacctcttctcagaccccgagggtttaaaagagactcactccctgctc
tgctccctggcccagctcccctcctccccgtcaggaggaccctccaccccacagcagctc
ctcttcacctcctgggagacggaagagaaccagagctgtgtgaaaggaggttatgcagca
catctagtggagactgccatgttgtcgtcccagaccagccagcggacaacctcgtcaaca
aacccaactctcactccaacgaagacctctactaacccagataccttcaccctccaaact
ctaaccaatccccttctctctgacgtcctatcccacgtagctccaggaggggacagagac
tcctcctgctgtgtcccctgtgtcctgttcttgacccagcgccatctctgtgtgctgaag
gtggacttcaaagctctggcccggggaaccaccggagatgaaccgtcagacgaccacaac
cagaggctccgctcctgctccaggctcagccgcgtccccctggcctccgtgctgccccac
ccaaggccgagtgccctgtatggggctggtgctgggtctatccctgcctactctcccagc
tgcccctggcaccaccgttcccccagagacagtcgtgtcctggagctcctagtgggacag
gagagggtcacggcggtgttcccgttgcctcacgacaggctccgtttccagaaacagttt
accctgctgcgctccagcctcagggacatcaagactgtggctttcctgcagggtgggaac
gaacatagccacagtgactgggacagtcccaggacgataaacatacacacgtccactccc
aatgagaccaagagcacagaccgactgcaggttaacagatgtttaaaggggatggtgttt
gcttgtgatgtctatgagatgtttaaaggggatggtctgtgtgtgtgttttgaccaggaa
gagaaggaagagctgcatcacatcctgtggtcatcggtggttttttataagtcacctgac
gtcgaggccacttcctgtatcatgctctctactaaagccctctacttcctgctggatgac
tccgcctccacgctcaatgaccaatcactactgtgggactggagccactgtgaccatcgg
gacccagagctgatcatgtcttactgtttcaccatcgacctccacgacctccactctgtc
aacgtgggcctgtttgaccagtacttcagggtgatggggccgtcagcggaccacatcatc
tgctgtctgacgagggacagttacgggacacaccgcttcctgcagcagctgatgactgtc
ctctctctacaggacaaactaccctctcctgaaccctccgaacaagacttctacacacag
tttggaaataaatctacaggtaagatggggaactatgaactggtccactctagcagggta
aagttcatctaccccagcgaagaagagattggagacctgacctttatcgtagccgagagg
aaaggtccttctggggtatccagctgtaatatcctgctctacgtactggtcttccaggtg
cagacccaggggctaggtttctcccagacccaggggctaggtttctcccaggcccagggg
ctaggtttctcccaggccccagctgcagacagacagacttccactgggggtctgcagggg
gatagaaagtctcacctccacccccagagcccggtctctgctagccaaccccgtcttcac
ccctacccccaggctccaggtccagccccctccaccaggccccatatcccccaacagagc
ctgcctccccaggctccctccacccccaggcctgtcctccatcctaagactctgatccta
accagcacagacgttttcctgttggatgaggattacatcagctacccgctgccggacttt
gccaaggagccccctccccgagacaagtaccaattggccgacgctcgacgaataagagac
ctggatagagtcctcatgggttaccagacgtacccgcaggcgctgacgttagtcttcgac
gatgtcccggggccagacctcctctgtcagcttaccatggaccactttggagaagaggag
gtgggaggaggaggaggggagaaggggaggagatgtggcagaacagagagcgaggtactg
tggtgtatctatgtccccggagcagacagcagggagaggctgatatgtctgttagcaaga
cagtgggaagtgctgtgtagtagggagctgcctgtagaactcactggctga
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integrated database retrieval system