Oncorhynchus nerka (sockeye salmon): 115124429
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Entry
115124429 CDS
T07952
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator-like
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one02010
ABC transporters
one04145
Phagocytosis
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115124429
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
115124429
09144 Cellular community - eukaryotes
04530 Tight junction
115124429
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115124429
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
115124429
Transporters [BR:
one02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
115124429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
SMC_N
DUF87
AAA_29
AAA_16
NB-ARC
MMR_HSR1
AAA_23
MeaB
T2SSE
RsgA_GTPase
Fig1
DO-GTPase2
nSTAND_NTPase5
AAA_30
NTPase_1
Motif
Other DBs
NCBI-GeneID:
115124429
NCBI-ProteinID:
XP_029509720
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
DLALLPEKDKTPLMEGGVTVSGGQRARIGLARAVYKDADLYLLDSPFTHLDIVTEKEIFE
RCLCKLMSSKTRIVVTSKLDHLKRADKILLLHNGVCYFYGSFSQLQAKRPDFSSLLLGLE
AYDNIKAERRSSILTETLRRVSIDESAVLRGHEPIRQSFRQPPPSVINGNTGPQGITIAG
GDGLTVVEKRKQSIILNPLATARKFSFIGTGPQNSQAPTPGSTTIEDGVRELSERKFSVV
PEDDQVEESLPRGNLYHDGLQHLSGQRRQSVLQFITNAQGQGRREQLQTSFRKKLSVTPQ
CELASELDIYARRLSKDSVYDISEDVDEEDMEQCFADERENVFETTSWNTYLRYIFTNRN
LVYVLIFIFLIFALEVAGSVLGIFLITDKIWTEEANPSAPNYVDQQHSNASSPAIQQSVI
VTPTSAYYIIYIYVATSESVLALGFFRGLPLVHTLLTVSKRLHEQMLTAVLRAPMAVLNT
MKTGRIMNRFTKDMATIDDMLPLVLFDLIQLTLIVLGAIFTVSIMRPYIFIAAIPLAVIF
VVLRKYFLRTGQQLKQLEAEARSPIFSHLIISLKGLWTIRAFGRQCYFETLFHKALNTHT
AIWFHYLSTLRWFLFRCDIIFVFFFSAAAFIAVGTNQDKPGEIGIIVALAMLILGTFQWA
VITSITVDGLMRSVDRVFKFIDLPQEEPRPSGGGKVTDLVLDNPHAQDCWPNQGHMDVQG
LTVKYTEAGRSVLQNLSFTVEAGQSVGVLGRTGSGKSTLLSALLRLASTDGEISIDGVSW
NSVTLQTWRKAFGVVPQKIFILTGTFRMNLDPHACHSDEELWRVAEEVGLKSVIEQFPDK
LDFQLEDGGYVLSNGHKQLMCLARSILSKARILLLDEPSAYLDPITLQVLRKTLKQSFSN
CTVILSEHRVEPLLECQSFLMIEGSSMKRYDSIQKLLNETSHLKQAISAAERLKLFPLHR
LNSSKRPPQSQQPKITALQEEAEDEVQDTRL
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
gatctggccctgctgccggagaaagacaagacgccccttatggagggaggggtgaccgtt
agtggaggtcagagggcaaggataggtctggccagagccgtgtacaaggatgctgacctc
tacctgttggattcgcctttcacccacctggacattgtgacggagaaagagatctttgag
aggtgtctgtgtaaactgatgtcctccaagactcgtatcgtggtcaccagtaagctggac
caccttaagagagcagacaagatccttctgcttcacaacggagtgtgttacttctacggc
tccttctcccagctgcaggccaagagaccagactttagctccctgctcctgggcctggag
gcctacgacaacatcaaagccgaacgccgcagctccatcctcaccgagaccctccgacgt
gtctccatcgacgaatccgctgtcctccgtggccacgagcccatccgccagtccttccgc
cagcccccgccttcggtcatcaacggcaacacgggacctcaaggcatcaccatcgccggg
ggcgacggtctcacagtggtggagaaacgtaaacagtcgattatcttaaatccattagca
acggcacgtaagttctccttcatcggtactgggccccaaaacagccaggctccaacccca
gggtccactaccatcgaggatggcgtgcgggagctgtcggagaggaagttctctgtggtg
cccgaggatgatcaggtggaagagtcgctgccccgggggaacctgtaccacgacggtctg
cagcacctgagcgggcagcggcgccagtctgtgctgcagttcatcaccaacgcacagggg
cagggcaggagggagcagctccagacatccttcaggaagaagctgtccgtcacgccgcag
tgcgagctggcctctgagctggacatctacgcgcgacgcctgtccaaagatagtgtctat
gacatcagtgaggatgtggatgaggaggacatggagcaatgctttgcagacgagcgtgag
aacgtgtttgagacgacgtcgtggaacacctatctgcgttacatcttcaccaacaggaac
ctggtctacgtcctcatctttatcttcctcatcttcgctctcgaggttgctggctctgtc
ctggggatatttcttatcacagataagatctggacagaggaggccaacccatcggcgcct
aactacgtagaccaacaacactccaacgcctcgtcacctgccatccaacagtcagtcatc
gtcacgccaaccagcgcctattacatcatctacatctacgtggcgacgtcggagagcgtt
ctggcgctggggttcttcagaggcctgccactggtccacaccttactgaccgtgtccaag
aggctgcatgaacagatgctcactgctgtgctcagggcccccatggctgtactcaacact
atgaaaacaggtcggatcatgaacaggttcactaaagacatggccaccatcgacgacatg
cttcctcttgtactgtttgacctcatccagttaactctgatcgtgttgggagcaatcttc
actgtgtccatcatgcggccgtacatcttcatcgccgcgatcccattggccgtcatattc
gtggtcctgaggaagtacttcctgcgtaccggacaacagctgaaacaactagaagctgag
gcccgaagccctatcttctcccacctcatcatctctctaaagggtctgtggaccatccgt
gcgtttgggcgtcagtgctactttgagacgttgttccacaaggccctgaacacccacacg
gccatatggttccactatctctccacgttgcgatggttcctcttccgctgtgacatcatc
ttcgtcttcttcttcagcgccgcagccttcatcgccgtgggaaccaaccaggacaagcca
ggggagattggcatcatcgtggccttagccatgcttatccttggtacgttccaatgggct
gtcatcaccagcatcactgtggacggactgatgcgatcggtagatcgggtcttcaagttc
atcgacttgccgcaggaggagcctagacccagtggtggtggtaaagtcacagacctggtc
ctcgacaacccccacgcacaagactgctggcccaaccagggccacatggatgtccagggg
ctgactgtcaagtatacagaggccggacgctctgtgctgcagaacctgtccttcaccgtg
gaagcgggccaaagtgtgggtgtgttggggaggacgggctcagggaagagcaccttgctc
tctgccctgctgcgcctggcctctacagatggagagatctccattgacggggtctcctgg
aactctgtcacactacagacctggagaaaagccttcggagtggtgccacagaaaatcttc
atcctgactggaacattccgtatgaacctggatccgcacgcttgccacagtgacgaggaa
ctgtggcgggtggctgaggaggtgggtctgaagtccgtgatagagcagttcccagacaag
ctggacttccagctggaggacgggggttatgtcctgagtaacggacacaagcagctcatg
tgtttggcccgctccatcctcagcaaggcccgcatactgctgctggacgaacccagcgcc
tacctcgaccccataacattgcaggtcctgaggaagacgctgaaacagtctttctccaac
tgtacagtcatactgtcagaacacagagtggaaccactgctggagtgccagtccttcctg
atgatcgagggcagttctatgaagcggtatgactctattcaaaagcttttgaacgagacc
agccacctgaagcaggccataagtgctgctgagcgcctcaaactcttccccctgcatcgc
ctcaactccagcaagcgaccccctcaatcccagcagcccaagatcaccgccctgcaagag
gaggctgaggacgaggtccaggacacacgtctgtaa
DBGET
integrated database retrieval system
