Oncorhynchus nerka (sockeye salmon): 115124544
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Entry
115124544 CDS
T07952
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115124544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115124544
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115124544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
Cnd3
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
115124544
NCBI-ProteinID:
XP_029509843
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MFICGLQDSGDYPLTMPGPLWKKFRYNFCEFICVLIRQCQYSIIYDEYLMDTVISLLTGL
SDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQRQYEAERNKMAGKRANEKLELL
LQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDS
YLKYVGWTLHDRQGEVRLKCLKALQNLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVA
VEAIRLITLILQGSEDALSNEDCENVYHLVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEE
LAKRRGRSSPNGNLLRMLVLFFLESELHEHAAYLVDSLWESSQELLKDWECMTELLLEEP
VQGEEVLSDRQESSLIELMVCTIRQAAEAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEH
FIMALPMLLSKYQADSEKVANLLQIPMFFDLDVYSAGRMEKHLDALLKQIRQVVDKHIET
DVLEACSKTYSILCSEEYTIMNRVDIARSQLIDEITDRFTHSVEDLLQEAEEADDDDIYN
VLSTLKRLTAFHNAHDLTRWDLFGSCYRLLKAGIEQGAMPEQIAVQALQCSHYSILWQLV
KITEGTPSKEDLVALRRVVKSFLAVCQQCLSNVNTPVKEQAFMLLCDLLMVFSHQLVSGG
REGLEALVFNPDSTLQNELLTFILDHVFIDQDDENQSMEGDEEDEANKIEALHKRRNLLA
AFSKLIIYDIVDMPAAADIFKHYMKVLT
NT seq
2246 nt
NT seq
+upstream
nt +downstream
nt
atgtttatctgtggtctgcaggacagtggggactaccctctcaccatgcccgggccgctg
tggaagaagttccgctacaacttctgtgagttcatctgcgtattgatacgtcagtgccag
tacagcatcatctacgatgagtacctcatggacacggtcatatccctcctcacgggactg
tctgactcacaggtcagagctttcagacacaccagcacactggcagcgatgaagttgatg
acagcgttggtgaacgtggcgttgaacctcagtatccaccaggacaacacccagagacag
tatgaggctgagaggaacaagatggccggaaaacgagccaatgagaagctagagctgctg
ctgcagaagaggaaggagctccaggagaaccaggatgagattgagaacatgatgaactct
atcttcaaaggaatctttgtccaccgctacagggatgctatagctgagatcagagctatc
tgtattgaggagattggagtttggatgaagatgtactctgacgccttcctcaacgacagc
tacctgaaatatgtaggatggaccttacacgaccggcaaggtgaggtccgtctgaagtgt
ctgaaggctctccagaacctgtacaccaacagagaactgtttcctaaactggagctgttt
accaaccgcttcaaggaccgcatcgtgtccatgactctggataaggagtatgacgtggct
gtggaggctattagactgatcactctcatcctgcagggcagcgaggatgcgttgtccaat
gaggactgcgagaatgtctaccacctggtttactcggcccacagacctgttgccgtggca
gcaggagagttcctgcacaggaagttgttcagcagacatgacccccaggcagaggaggag
ttggctaagaggagagggaggagcagccccaacgggaacctcctccgcatgctggtgctg
ttcttcttggagagtgagcttcatgaacatgcagcctatctggtggactctctgtgggag
agttctcaggagctgctgaaggactgggagtgtatgactgagttactgctggaggagcct
gtacaaggagaggaggtgctctcagacagacaggagagttccctgatagagttgatggtg
tgtaccatccggcaggcagcagaggctcacccacccgtcggcaggggcactgggaagcgt
gttctcacggcgaaggagaggaagactcagatagacgacaagaacaaactgacagaacac
ttcatcatggccctgcccatgctcctgtctaagtaccaggccgactctgagaaggtggct
aacctgctacagatccctatgttttttgatctggacgtgtacagcgctgggcgtatggag
aagcacctagatgccttactgaagcagatccggcaggtggtggacaaacacattgagaca
gatgttctggaggcctgcagtaagacctacagcatcctgtgttctgaggagtacaccatc
atgaacagagtggacatcgcccgctcgcaactcatcgacgagataacggaccgcttcaca
cactccgtagaagacctgctgcaagaggccgaggaggccgacgatgacgacatctacaac
gttctgtctaccctcaagagactcacggccttccacaatgctcatgacctgacgcggtgg
gacctgtttggtagctgctacaggttgttgaaggctggtattgagcagggggccatgcca
gagcagatcgctgtccaggccctgcagtgttcccactactccatactgtggcagctggtg
aaaatcacagagggaactcctagtaaggaggacctggtggctctgaggagagtggtgaag
tccttcctggctgtctgtcagcagtgtctgtccaatgtcaacacacctgtcaaagaacag
gccttcatgttgttgtgtgacctgctgatggtcttcagtcaccagttggtgtctgggggc
agagaaggactggaggccctggtgttcaacccagacagcaccttacagaacgagctgctc
accttcatcctggaccacgtctttatagaccaggacgatgagaaccagagcatggaaggc
gatgaggaggatgaagccaataagatagaagctcttcacaagaggagaaacctgctcgca
gccttcagcaaactcatcatctatgacatcgtggacatgcctgctgctgcagacatcttc
aaacactacatgaaggtgctgacctg
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