Oncorhynchus nerka (sockeye salmon): 115124598
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Entry
115124598 CDS
T07952
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115124598
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
one04091
]
115124598
Lectins [BR:
one04091
]
C-Type lectins
Lecticans
115124598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
115124598
NCBI-ProteinID:
XP_029509873
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MLLLYRLILLSASLSGSGVAQLTDSYGLSFALRSELSEDAILVENNGIRVPFGRSVFIDP
VNDLVIQTQPGDRCSITVLDNQPLSQRPGQLSPKKFPCDFGPNDVTYSHFGSRSLAKDRV
RLQLRYDTQTETVIIPFMTEVEVVFTQLEVLTKNMPLTVAKLNGVSNAIDKNYLEFTYDR
NSQKCKVNSLASGSALPKYGRLVDDGLTKIMDCDEFIQSDIRYKHTFVHKSPNRDYVPMV
VELCDKEGNKVKEEYFQLMIHIKEGEANTPPKPSFMAMLMMEVSQFVMTALTTDMLAAED
LESNPDELIFNITSPLSYEDGYIVSTDDRNLPITSFYQSDLRDLKIAYKPPSLDSDMERI
FQIEFEVVDPDVAVSDPFAFMIVVKPINSLAPVVTLNAGQLLYEGQSRPLFSTHNLEISD
EDDLDSVTATVVDGLRHGDLTVLGLRRKYFTAADLNTGVVIYQHDGSDTDSDNIVFRMTD
GKNQVEFLFPLTIVPTDDEPPIINVNTGLVLFKNQIMAISPLMLSAADIDSEDSTIKFII
EPPFSTIGGLLLRQSDAPEDPESWKFNAEDEVYEKEVTEWLQKDITDGKVFYKHTGPHNT
DTVIDQFVFKVHDDNDPPNESGESTFIIRVLPIDDLPPELFPGTTLQVTVQEYQLTHFGK
NMLLYTDLDSEEHDLKYTVIQPPTDTDENSPVVFGSIVLTESPDTEVNEFTQAQVNHHKI
SYSPPDQELGITAHVLQFRFSVEDAAGNSVEGAFRIFLHPVDNKPPQITNIGFSVFEQGM
HVISSAELDTSDPDTDSKQISFTLSQPPLHGQVQHAFSDLPKGGAFFLEDISDRKIIYVQ
NGDETVSDVFQLDVSDGIHVVTVKVRVVVKPVDDETPAVSLPPGTVGSHMDVLENGAMEI
TTSVLQGWDEDTADLQLTFIIENAPVFGVILVAGAHAVKFTQVDIINGLVVYAHTGGEIG
LSSIMDSFNLTLTDMSDDWLVGGNKVNGVHVRVTIIPVDNQAPEVTVGDQFVVVEGEKYA
IGTQYLKAEDKDTISDDILCTIIVQPTSGYVENISPAPGSESSRSGTAVSAFYIRDIREG
HVYYVQSIHKGLEPVEDRFTFRCSDGINLSKRHFFPIVIIPANDEKPEIYLREIVVMEGM
NIVIDTHLLNGADTDIPAEELTFIISKLPKHGFILNQLATGSVPVINFTLEQIREASSFI
YEHDDSETTEDSFDVILTDGKYSVERTAMVMIIGLDAETPRMLVNVGLEVDVGEAKEINN
KVLKATDLDSDDGSLTYVIRFGPVQGILQRKTPSGSLENIMLGMNFTQRDVDKRLIVYTH
NGQEGICDLVKFDVTDGMNPLIDRYFYITIRSIDMVFPDVVSKGVSLKEGGRVTLTTDLL
STSDLDSPDERLVFTITRAPVRGHLECSDTPWIPIVSFTQLQLAGSKVYYIHTLDDEVKM
DSFEFEVTDGYNPVFRTFRVAIVEVDNKKPVLTFHRLVVTEGQSKLLTPFELTAEDQDTA
DLLLKFTVTQPPAHGKLLYNHTSPVTIFTKQDLSENLISYKHDGTETSEDSFSFTMTDGT
HTDFYVFSDAVFETRRPQTMNITVVAIDNGVPQLVVNKGAPTLRILSTGHLGFLVTSTVL
RALDRDSVPASLVFHVTTEPKHGYLINLGKGNDSIDTFSQADIDDLKICYVLRNEERATT
DLFLFSVEDN
NT seq
5071 nt
NT seq
+upstream
nt +downstream
nt
atgctactattgtatagattgatcctcctttccgcgtcgctgtcgggtagcggcgtggca
cagctcacagatagctacggattatctttcgcgttgaggtcagaactgtctgaggatgcg
atactggtggaaaataacggaatacgcgtgcctttcgggagatccgttttcattgatcct
gtcaatgatttggtgattcaaacgcaaccgggggaccggtgcagtatcaccgttctggat
aaccagccgctttcccagagaccagggcaactgtctcccaaaaagtttccgtgtgatttc
ggtcccaacgacgtcacctactcccacttcggctcgaggagcctggctaaagacagagtg
aggctacagctcaggtatgatactcaaactgaaaccgttatcatcccattcatgacggag
gtagaagtggtttttacgcaactggaggttctcaccaaaaacatgccgctgaccgttgct
aaattgaacggcgttagtaatgccattgataaaaattatttggaattcacttatgacaga
aactctcaaaaatgcaaggtgaattctttagcgagtggtagcgctctccccaagtacgga
agacttgtagatgatggactcactaaaattatggactgtgacgaattcattcaatctgac
atccgttacaagcacacgtttgttcacaaatcacccaacagagactatgtgcccatggtt
gttgaactatgtgataaagagggaaacaaagtaaaagaggagtatttccaactgatgatc
catatcaaggagggagaggcgaacactcctcctaaacccagcttcatggcaatgctgatg
atggaggtgagtcagtttgtgatgacagctctgaccactgacatgctggctgcggaggac
cttgagtcgaaccctgatgaactaatcttcaacatcacctcccccctctcttatgaggat
ggttatatagttagcacggatgacaggaacctacccatcacctcgttttaccagagtgac
ctacgggacctgaaaatagcctacaagcccccctccctggactcagacatggagaggatc
tttcagatagagttcgaggtggtggatccggacgtggctgtctcggacccctttgcgttc
atgattgtggtgaagccgattaactctctggcgccggtcgtgacgctgaacgcgggtcag
ctgctttacgaaggtcagtcccgcccccttttctctacccacaacctggagattagtgac
gaggacgacctggacagcgttacggcaaccgtcgttgacgggctccgccacggcgacctc
acagtcctggggttgcgcaggaagtacttcacggctgccgacctgaatacgggtgtggtc
atctatcaacatgatggcagcgacacggacagtgacaacatcgtcttcagaatgacagat
ggcaagaaccaggtggagttcctgtttcccttgacgattgttcccacggacgacgagcct
cccatcatcaatgtcaacactggtcttgtgcttttcaagaaccagattatggctatctct
cctctgatgctcagcgccgctgacatcgactcagaagattccacgatcaaattcattatc
gagccgccattctcgaccatcggggggttgctgctgaggcagtccgacgccccagaggac
cccgagtcatggaagttcaacgctgaggatgaggtgtatgagaaggaggtgacagagtgg
ctgcagaaagacatcacagatgggaaggtgttctataaacacaccggaccacataacact
gacacagtcatagaccagtttgtgttcaaagttcatgacgacaatgacccgcctaacgaa
tcgggcgagagcacgttcatcatcagggttctacccatcgacgaccttccccctgagctt
tttcccggtaccacgctccaagtgactgttcaggagtaccagctgactcatttcggtaag
aacatgcttctctacaccgatctagactctgaggagcacgacctgaaatatacagtgatc
cagccgccaacagacacagacgagaacagcccggtggtgttcgggtccattgttctgact
gagagtcccgacactgaggtcaatgagttcacacaggctcaggtcaaccaccacaagata
tcctacagtcctcccgaccaggagctgggcatcacggctcacgtcctccagttccgattc
tctgtcgaagacgcggccgggaatagcgtcgagggggctttcaggattttcctccatcca
gttgacaacaaaccaccacagatcactaacattggcttttctgtgtttgagcaaggcatg
catgtgatatccagtgctgagttggacacatcagacccagacacagacagtaaacagata
tcgtttaccctcagccagcctccgctgcacggccaagtccagcatgccttctcagaccta
cccaaagggggagctttcttcctagaggacatctcggacaggaagatcatatatgtccaa
aacggcgacgagacagtgagcgacgtgttccaacttgacgtcagcgatgggatccatgtt
gtcacggttaaagtcagagtcgtcgtgaagcccgttgacgacgagacgccggctgtcagt
ttaccgcccgggacggtcggttcacatatggacgtcctagagaatggagctatggagatc
actacgagtgtcctccaggggtgggacgaggacaccgccgacctccagctgaccttcatc
atcgagaatgcgcccgtgtttggtgtcatcctggttgccggggcacatgctgtgaagttc
acccaagtcgacatcatcaacggtttagtggtgtatgcccacaccggcggagagattggg
ctttcgtccatcatggacagcttcaacctcaccctaactgacatgtcagatgattggtta
gtgggcgggaacaaggtcaacggtgtccacgtccgtgtcacaatcatccccgttgacaac
caggcccctgaggtaaccgtgggtgaccagttcgtcgttgtcgaaggagagaagtatgcc
atcggaacacagtatttaaaggccgaagacaaagacacaatcagtgatgatattctctgc
accatcatcgtccagcccacgtctggttatgtggagaacatctcccctgctcctggatca
gagagttcacggtcagggacggcagtcagcgccttctacatcagagacatcagagaagga
catgtatattatgttcagagtatccacaaggggttagaacccgtagaggacaggttcaca
tttagatgctctgacggtatcaacttatcaaaaaggcatttcttccctattgtgattatt
ccggctaatgatgaaaagccagagatttacttgagggagatagttgtgatggaggggatg
aatattgtcatagacactcatctcctgaacggagcagacactgatatcccagcagaggag
ctgactttcatcatctccaaactgcccaaacacggctttatcctcaatcagctagccaca
ggctcagtcccagtcataaacttcaccttagagcagattagggaagcttccagtttcatc
tacgaacatgacgactctgagaccaccgaggacagctttgacgtcattctaacagacggg
aaatattcagtagagagaaccgccatggttatgatcatcggcctcgacgccgagacgccg
agaatgctggttaatgtcggtctggaggtggacgtaggtgaggcgaaagagatcaacaac
aaggtcctcaaagccaccgatctagactcggacgatggatcgttgacgtatgtgatccgc
ttcggtcctgttcagggtattcttcagaggaaaaccccatctggttctctggagaacatc
atgttaggcatgaatttcacacagagggatgtggacaaaaggttgatcgtttacacacac
aatggtcaggaaggcatctgtgacctggtcaagttcgacgtcaccgacggcatgaaccct
ctgatcgatcgttacttctacatcaccatcaggagcatcgacatggtcttcccagacgtg
gtcagcaagggagtctctctgaaggaaggcggtagagtgacattgaccacagatcttctc
agtactagcgatctcgacagtccagatgaacgtttggtgttcaccatcaccagagctcca
gttagaggacacctggagtgtagtgatacaccatggatccccatcgtgtcattcacccaa
ctccagctggctggcagtaaagtctactacatccataccttggacgacgaagtcaagatg
gacagttttgagtttgaggtaaccgacggttacaacccggtgttccgtactttccgagtc
gctatcgtggaagtggataacaagaaaccagttttaacgtttcacagactcgtggtcacc
gaggggcagagtaaactcctcacgccattcgagctgaccgcagaggaccaggacacagct
gacctgttgttgaagttcaccgtcacccaaccaccagcgcacggaaaactcctctataac
cacacctcaccggtcaccatcttcaccaagcaagacctcagcgagaacctcatcagctac
aaacacgatggcaccgagacctccgaagattccttctcatttactatgaccgacgggacg
cacactgacttctacgtgttctccgacgcagtgttcgagacacggcgcccacagacaatg
aatatcacggtggtggccatagataacggtgtccctcagctggtggtgaataagggcgcc
ccgacactgaggatcctgtccacggggcacctggggttcctcgtgacctccacggttcta
cgggcgttagacagggacagcgttccggcttccttagtgttccacgtcaccacggaaccc
aagcatggttacctcatcaatctgggcaaagggaacgactccatcgacaccttcagtcaa
gctgacattgatgacctaaagatctgctatgtgttgagaaatgaagagagggcaaccaca
gacctcttcctcttctctgttgaagacaacg
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integrated database retrieval system
