Oncorhynchus nerka (sockeye salmon): 115124628
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Entry
115124628 CDS
T07952
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115124628 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115124628 (rad54b)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
115124628 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
115124628
NCBI-ProteinID:
XP_029509911
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MRRSGAPSQVFGNMAKKPRFVPPGASLAGPPDPPVGTLLEPEPLAPKLSPGNVLYKVQRS
LSAPAPPLALPVKAFSLAKSSPQAPGLSRALARVLGAADSKKNELEPEDPSFTEENTGDP
AGFRCSSQSPAGGCGPVGVGAGSGSGAGSDGPRYFSVMWCKASGRKHKRWQGDAVLVTRG
RTATLKDMEGKDIGKGSGYKVSELASLGEGETLMIGAKQVEVMGLVSELDYNKGRCFLDV
HVEKEEPKISAPPPSRRPASKPFCRPTLLGGETDRGVAKPQEEGPCIPRHDPLAPGAIVM
PRPSTNHQWAYNKAGLPLVDVVVDPYLTAHLRPHQRDGLLFLYQCVMGMRATCRYGAILA
DEMGLGKTLQSVALTWTLLKQGPYGGKPVAKLVLVVAPGSLVQNWGAEFKKWLGRERINV
YTVNQDHRVELFAASPLHSVLVISYEMLLRSLEVVQKLEFGLVICDEGHRLKNSSIKTSS
ALSGLSCTRRVILTGTPVQNDLQEFYSIIEFVNPGIMGSSAAYRKVYEEPILRSRQPICT
EEERVLGEEQAAELSRLTGLFILRRTQEIINRYLPPRLDWTVFCSPSPLQRELYQALLSH
RVIRACLQGSTQTHTHLACITALKKLCNHPGLLYSTVQERSDGSSAEGSLYEGLRGVFPE
SYSSGGFSTADSGKLLVLSDLLTTIHHLSPTDRVVLVSNYTQTLDLIQDLCVHLGYTYCR
LDGNTPTIQRQRLVDNFNSPHSAHFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQ
AMSRVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSSNEL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgctcaggggcccccagccaggtctttggtaacatggcgaagaagccccggttc
gtccctcctggagcctccctggctggtcctcctgatccccctgtcggtactctgcttgaa
ccggagcctctggcccctaaactctccccggggaacgtgctctacaaggtccagaggagc
ctctcagcccctgcaccgccccttgccctgcctgtgaaggccttcagcctggctaagagc
agcccccaagccccaggcctgtccagagctctagccagggtgctaggtgcagcagacagt
aagaagaacgagctagagcctgaagacccttcctttacagaggagaacactggagaccca
gctggtttcagatgttcctcgcagagtccggcaggaggctgtggtccagttggggtcggg
gcagggtctggtagcggtgctggttctgacgggccgcggtacttcagtgtgatgtggtgt
aaggccagtgggaggaaacacaaacgctggcagggagacgctgtcctggtgacacgaggg
cgcaccgccacgcttaaagacatggagggcaaggacatcggcaagggtagtggctataag
gtatcagagctggcatcgctgggtgaaggagagaccttgatgataggagctaaacaggtg
gaggtgatgggactcgtatcagagctggactacaataagggccgctgtttccttgacgtc
catgtggagaaggaggagcctaagatatcagctcctcccccctcacgacgcccagcttcc
aaaccgttctgccgtccgacgctattgggcggagagactgataggggagtggccaagcct
caggaggaggggccctgtataccacgccatgaccctctagcaccaggagccattgttatg
ccccggccctcaaccaatcaccagtgggcgtataacaaggcaggcctcccactggtggac
gtggtggttgacccctacttgaccgctcacctccgaccccaccagcgagacggcctgctg
ttcctctaccagtgtgtcatggggatgagggctacatgtaggtacggtgctatcctggca
gatgagatgggtctgggtaagaccctccagagcgtggctttgacatggacgctgctaaag
cagggcccatacggcgggaagccggttgctaagcttgtgctggtggttgcccctggcagc
ctggtgcagaactggggggcggagtttaagaagtggcttggccgtgagaggatcaacgtc
tacactgttaaccaggaccacagggtggagctgtttgcagcgtctcctctccacagtgta
ttagtgatcagctatgagatgctgcttcgctctctggaagtggtacagaagctggagttt
gggctggtgatctgtgatgagggtcacaggttgaagaacagcagcatcaagacttcctct
gccctcagcggtctcagctgtacacgcagagttattctgacaggtactcctgtccagaat
gacctgcaggagttctattccatcatagagtttgtgaacccaggaattatggggtcgtct
gctgcctacaggaaggtgtacgaggagccaatcctccgctcccgacagcccatctgcact
gaggaggagagagttttgggggaggagcaagcggctgagctctctcgtctgactggtctg
tttattctgaggcggacccaagagatcatcaaccgctacctgccacctcgtcttgattgg
acagtgttctgtagcccctcccccttgcagcgggagctgtaccaggctctcctctcgcac
cgtgtcatccgagcctgtctacaggggtcgacacagactcacacacacctcgcctgcatc
accgccctgaaaaagctctgcaaccacccaggactgctctactccactgtacaggagcgt
tctgatggcagctcagcagagggttctctgtatgaagggctaagaggtgtctttccagag
tcttactcttctgggggcttcagtacagctgactcagggaaactactggtcctgtctgac
ctactgaccactattcaccacctcagccctactgacagggtggtgttggtgtccaactac
actcagacgttagacctaatccaggacctgtgtgtccacctgggctacacctactgtcgc
ctggacggcaacacccccaccatccagaggcagcgattggtggacaacttcaacagccct
cactccgcccacttcctcttcctcctgagttctaaagccggaggggtggggcttaacctg
atcggcgcctcccacctggtcctatatgacatcgactggaaccctgccaacgatatacag
gcaatgtcacgagtgtggagagacggacagaagaagactgttcacatctaccgcctgctc
actgcaggtaccatagaggagcgtatcttccagaggcaggtgtccaaacaggggctttct
gggacagtggtggacttggggaaaggggcggagcacaccagcttctcctccaatgagctg
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