KEGG   Oncorhynchus nerka (sockeye salmon): 115124706
Entry
115124706         CDS       T07952                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115124706
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115124706
Spliceosome [BR:one03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115124706
 Complex B
    115124706
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 115124706
NCBI-ProteinID: XP_029510055
LinkDB
Position
LG1:complement(23690478..23702676)
AA seq 236 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRGGGHHSRSRSRERRSRSRDRGRGGGGGRDREKRRSRDRERSGRF
NT seq 711 nt   +upstreamnt  +downstreamnt
atggcggaatacctggcgtccattttcggtacagagaaagataaggtgaactgttctttc
tactttaaaattggtgcctgccgccatggtgaccgatgctccagattacataataaacca
actttcagccagaccattgccctcttgaacatttaccgtaaccctcaaaacactgcccag
tctgccgatggtttgcgctgtgccgtcagtgatgtggagatgcaggagcactatgacgag
ttctttgaggaggtcttcacggagatggaggagaagtatggagaggtggaggagatgaac
gtgtgcgataacctgggagaccatctggtcggaaacgtatatgtaaagttccgtcgtgaa
gaagacgcggagaaggcagtgatggatctgaataaccgctggttcaacggtcagcccatc
cacgccgagctctctcccgttaccgacttcagagaagcctgctgccgccagtacgagatg
ggggagtgcactcgaggaggcttctgtaacttcatgcacctgaagcccatctctagggag
ctgaggagggagctatacggacgccgcaggaagaggggaggggggcatcattctcgctcc
cgttccagggaacgtcgttcgcgctcaagggacagaggaaggggaggtggaggtggacgc
gaccgcgagaaaaggcgctccagagaccgagaacgctctggaagattctaa

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