Oncorhynchus nerka (sockeye salmon): 115124735
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Entry
115124735 CDS
T07952
Symbol
setd1b
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115124735 (setd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115124735 (setd1b)
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
115124735 (setd1b)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115124735 (setd1b)
HMT complexes
COMPASS/SET1 complex
115124735 (setd1b)
COMPASS/SET1 complex (yeast)
115124735 (setd1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
115124735
NCBI-ProteinID:
XP_029510070
LinkDB
All DBs
Position
LG4:25623603..25647352
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AA seq
1881 aa
AA seq
DB search
MSKPGDRNRLNEDHGRKQSSSLANGMDNHHPVCSSGEKRSHHWRSFKLIIDPALKKGSHK
LYRYDGTSFNMPNPGMPPVDIVRDPRIGRLWTKYKETDLPVPKFKIDECYIGRVPPKEVT
FARLNDNIREGFLTDMCKKFGDIEEVEILYNPKNKKHLGIAKVIFGTVKAAKDAVQTLHN
TSVMGNIIHVELDPKGENRLRYFQLLLNGTFTPRTLPVGGEVSPRSLAEALLACEPLRRL
SESSSSAAVGGTVTPSGTGTNTTPLSQDTAYSSLRQDTPQSQGTPHTPRQTSTPFSQDSS
YSSRQGTPAYQSSRAEGSGSYKSRRHESKFQDAYNRRPERRYVHGAGGSGSSSSSSSYRG
NFEQSAFKQHQPAPPEPPPSASSFAHTPPPPTSASFKSAFSPYQQAPMPPAFPPSEPPIH
QPVQREAEYRRPPQPPMAPATDFMPVKDKPGTPPIPEPPPEPKAHPSTPLARKPEPCPPS
PGTPTLESERNSLDSRIEMLLKEKRTKLPFLPGGDSSDTEVRMEGSPISSSSSQLSPIPP
YGGTHTSRPSSTGLEXVSPTPLPDSDDEEPIPGTGLLLERVISPDHLHGMNTSDPKDGRL
GNHTPTDKLESHQSSGEDMEISDEDDMPGTPTHSGDCAKGIVVHSAVSPMQSMPLPPPGF
HPLPPQAGFGLPHHLSAVPGPHLAPGVPHPMLPHLYPHGMVPMMQMELMSCLPQWGSVHM
SFQMQTQMLSRMAQTRGPYPYPHFMNTGGTASAGSAAMQFGGPYLPLSMSSTPAASAGGH
GQQPWPHPSIPKFNPAVPPPGYEAKKEDPHKATVEGVLLVIVKELKAIMKRDLNRKMVEV
VAFRAFDEWWDKKEHSAKASLTPVKAGEEEKEKPKPKETMGSSLLENWNKGEGLGYEGMG
LGIGLRGAIRLPSFKVKRKDPPDATSTGDTKRARPSTPVDDELEDIAELPEDGSRMDEDS
AALRRRHARPLELDSEGEEEEETSGKEESLSDREEEPDETEASERLSSGKESGEEEDEEE
DEAASTSDGESSESSDEDVASSASSKVVSDSSASGDSSDYDSSSEEEAEEEEEEEEEEEA
AVDVESLPDKDEDRVRTSSSSSSSSSSSSEEEVEPKAPSTPLGPPPEDEPSELAGLEEDQ
RPREGLKLKPNHRSLSEFTGAAEPGQTSLEDLRPPSPKGVPAEESDLDLEVTIPVLKTEP
QDDVTNLRPPTPTGSLADSDQDSRPKAHTEDKDLPCTPGRGASTSLDPDAVLLRSLVVPP
MHLPLPPSPAMGGHSLLLPPPGPMPDLPLPFRARLSTDEDVPRTPGRDLMYRARDLGKSQ
NSTENVPVTPGSDAPLTGSSLVSLSSPHISGSPFSYPAQSPVLSAGIPRTPGRDLTFTPV
FPDPTALAAGLPIHRKASSESPLFKEPPLSTLASQTLPLVSLQGQALTSVPKDLPAVPAL
DLPVPPDITPPKRKPGRPKSKKAAALAALAALTSPKTEPMELSVTPTSMPPSLPHDAQLR
ELSADTAAAAILPGIPSYVGLDSSTVGLDFREGEPEPHTVLPLDDRFLPYEEEERVQKPA
RKVRRGWEELLLASHSPAFTPPRPHLAPRSEFEEMTILYDIWNDGIDEEDIRHLQVTYDK
MLQQDNGNDWLNDTLWVQHPPTNIPAVKRKRRDDGMRDHMTGCARSEGYYKIDKKDKIKY
LNSNKHLLEEGPIDMQGKSIPAQPLVSTRAGSERRSEQRRLLSSFSCDSDLLKFNQLKFR
KKKIRFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFR
VDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSRQPINVNEEITYDYKF
PIEDEKIPCLCGAENCRGTLN
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccaggggacagaaacaggctaaacgaagaccatggcagaaagcagagttca
agtttggcgaacggcatggacaaccaccatcccgtttgcagttcgggagagaaacgaagt
caccattggagaagtttcaagttgattattgacccagcgttgaaaaagggatcgcacaaa
ctgtatcgttacgatggaacttcatttaacatgcccaaccctgggatgccacccgtcgat
atcgtccgagacccaagaatcggtcgtctctggacaaagtacaaggagaccgatctgccg
gttccaaagtttaagattgatgaatgttacatcggccgtgttccacccaaggaggtaaca
tttgccaggctgaatgataacatcagagaaggttttttgactgacatgtgcaagaaattt
ggagacatagaagaggtggaaattctctacaatccgaagaacaaaaagcatttaggaata
gctaaagttatttttggaactgtaaaagcagccaaggatgctgtccagactctacacaac
acgtctgtcatgggcaacatcatccacgtggagctggatcccaaaggagagaatcgcctt
cgatacttccagctacttctgaatggcaccttcacccctcggacacttccggtgggagga
gaagtgtcccctcgtagcctggcagaggctcttctggcctgtgaacccttgcgccggctc
tctgagagcagctcatctgctgcagtgggaggcacagtgacccccagcggcaccggcacc
aacaccaccccactgtcccaggacacggcttactctagcctaaggcaagacacgccgcag
tcccagggcacccctcatacccctcgccagaccagcacccccttctctcaggactccagc
tattccagcagacagggaaccccagcctaccagtctagccgggccgaaggctccggaagc
tacaagtctcgcagacacgagagcaagttccaggatgcctacaaccggagaccggagagg
cgctacgtccatggcgctgggggatcgggatcctcctcatcctcctcctcttaccgagga
aattttgaacagtctgcctttaagcagcaccaacctgccccacctgaaccccctccatct
gcctcatcctttgcccacacaccacctccccctaccagtgccagctttaagtcagccttc
tccccctaccagcaggcccccatgcccccggcgttccccccctcagaacctccgatccac
cagcccgtccagcgggaagcggagtaccggagaccaccccagccccccatggcccctgcc
actgacttcatgccagtcaaggataagccaggtactccacccattccagaacccccacct
gaacccaaggcccaccccagcaccccccttgcccggaaaccagagccctgcccaccttct
cccggcaccccgacgctggagtcagagcgaaatagcctggactcccgtatcgagatgctg
ctcaaggagaaaaggacaaagcttcccttccttcctggaggcgactcatcagacacggag
gtgcgtatggaggggagccccatctcctcctcttcctctcagctgtcacccatccctcct
tatgggggcacccacacctctcggccctctagcacaggcctggagngagtcagccctacg
cccctgcctgactccgatgatgaggagcccatccctggaacaggcttgctcctcgagagg
gtcatctccccagaccatctccatgggatgaacaccagtgacccgaaggatggtcgcctc
ggaaaccacacacccacagacaaattggagagccatcagtcttctggggaagacatggag
atctcggatgaggacgacatgccaggcacgcccacgcacagtggcgactgtgccaaaggc
attgtggtccactctgccgtgtcccccatgcagtcaatgcccctcccaccccccggcttc
catcctctaccccctcaagcgggcttcggtcttccacaccacctctctgccgtcccgggc
ccacacctggcacctggagtgccccaccccatgctgcctcacctctacccccatggcatg
gtgcccatgatgcagatggagctgatgagctgcctgcctcaatggggcagtgttcacatg
tccttccagatgcagacccaaatgctgagtcgcatggcccagacccgggggccctacccc
tacccacacttcatgaacacaggagggacggcttcagctgggtcagcagccatgcagttt
gggggtccctacctacccttgtccatgagtagcaccccagctgccagtgcagggggccac
gggcagcaaccttggccccatcctagcattcccaagttcaaccctgctgttcctccaccg
ggctacgaggctaagaaggaggatcctcacaaggccactgtggaaggggtgctgctggtc
atcgtcaaggagctgaaggccatcatgaagagggacctcaaccgtaagatggtggaggtg
gtggcctttagggcctttgacgagtggtgggataagaaagaacactcagccaaggcgtcc
ctgaccccggtgaaggctggcgaggaggagaaggagaagcccaagcccaaagagaccatg
ggctccagtctactggagaactggaacaagggagaaggcctaggctatgagggtatgggc
ctgggcatcggcctccgaggagccatccgcctgccctccttcaaggtgaagaggaaggac
cctcctgatgccacctccaccggggacactaagcgagcgcgaccctccacgcctgtggac
gatgagctggaggacatagcggaacttccagaagacgggtccaggatggacgaggacagt
gcggcattacggaggcgacatgcgcggccgctggagctggacagtgagggcgaggaggaa
gaagagacttcagggaaagaggagtctctgtccgatagggaggaggagcctgacgagaca
gaggcttctgagaggttgtcatcgggcaaggagagtggagaggaagaagatgaggaagaa
gatgaggcggcctcaaccagtgatggtgaatcatcggagtcgtcggatgaggacgttgcc
agttcagcatcctcgaaagttgtctctgactcctctgcgagtggggactcctctgactat
gattccagttcagaggaggaggcagaagaagaggaggaggaagaggaggaggaggaggcg
gcggtagacgtggagagtctaccggataaagacgaggaccgggttcggacatcttcgtcc
tcatcctcctcttcgtcttcctcatctgaggaggaggtggagcccaaggcgcccagcacg
cccttaggtcctcccccagaggatgagccctccgagctggctggtttagaggaagaccag
aggcctagggaggggctgaagctcaagcccaaccacagatccctcagcgagttcacagga
gcagcggagcctggccagaccagcctggaggacctcaggcccccttcacccaaaggagtc
ccagctgaggagtcagaccttgacctggaagtcaccatccctgtattgaagacagagccc
caggatgatgttactaacctgcggccgcccaccccgacgggctccctggctgacagcgac
caggactctcgacccaaggcccacacagaggacaaggatctgccctgtacgccaggtaga
ggggcttccacatccctggaccccgacgcagtcctccttagatccctagtagtcccacct
atgcacctccccctccccccttccccagccatgggaggccactccctcctgctaccgcct
cccggccccatgccggacctccccctcccctttagggccaggctgtccacagacgaggat
gttccccgcacccctggcagggacctgatgtaccgggcaagggacctgggcaagtcccag
aacagcaccgagaacgtgcccgtcacacctggcagcgatgcccctctgactggcagcagc
ctggtcagcctcagctccccccacatatccggcagccccttctcctaccctgcacagtcc
cccgtcctgagtgcaggtatcccccgaacccccggcagagatttgacctttacccctgtc
ttcccagaccccacagccctggctgctggccttcccatccaccggaaagcctcttcagaa
agtccgctgttcaaggagcctccactcagcaccttggccagccagaccctgccccttgtc
tccctccagggacaggccttaaccagcgtgccaaaagacctgcctgctgtcccggcctta
gacctcccagtgcccccggacataaccccgcctaagaggaagcctgggcgacccaagagt
aaaaaggctgcagctctggcagctctggcagcactgacttctcctaagactgagcctatg
gagctctcggtgactcccacctccatgcccccctctttgcctcacgatgcccagctccga
gaactctctgcagacacggctgctgcagccattcttcctggaatccccagctacgttggg
ctagactcctccacagtgggcctggacttccgggaaggggagccagagccgcatacggtt
ctgccccttgacgaccggttcctcccctatgaagaagaggagcgcgtgcagaagcctgcc
cgtaaggtgcggcgagggtgggaagagctgctgctggctagccactcccccgcgttcacg
ccgccgcggccccacctcgctccacgctctgagtttgaggagatgaccatcctgtacgac
atctggaacgacggcatcgatgaggaggacatccggcacctgcaggtcacctacgacaag
atgctgcagcaggacaatggcaacgactggctcaacgacacactgtgggtccagcaccct
cctaccaacatcccagcggtgaagaggaagaggagggacgatggcatgagggatcacatg
actggctgtgcccgtagcgagggctactacaagatcgacaagaaggacaagatcaaatac
ctcaacagcaacaagcacctgctggaggaggggcctatagacatgcagggcaagagcatt
cccgcgcagcccctcgtctccaccagagctggctctgagcgtcggtccgaacagcgccgc
ctgctgtcctctttcagctgtgacagcgacctgctcaagttcaaccagctgaagttccgt
aagaagaagattcggttctgtaagtcgcatatccacgactggggtttgtttgctatggag
ccaattgctgctgacgagatggtgattgagtacgtgggtcagaacatcaggcaggtgatt
gctgacatgagggagaagcgctatgaggacgagggcatcgggagcagctacatgttccgc
gtggaccacgacaccatcatagacgccaccaagtgtggcaacttcgcccgcttcatcaac
cacagctgcaatcccaactgctacgccaaggtgatcacagtggagtcccaaaagaagatc
gtcatctactcccgacaacccatcaacgtcaacgaggagatcacctacgactacaagttc
cccatcgaggacgagaagatcccctgcttgtgtggggcagagaactgtaggggaacgttg
aactaa
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integrated database retrieval system
