Oncorhynchus nerka (sockeye salmon): 115124788
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Entry
115124788 CDS
T07952
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115124788 (ythdc1)
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115124788 (ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
115124788
NCBI-ProteinID:
XP_029510118
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MAVDRRDDKEGELNVLDDILTEAPDQDDELYNPESEHHVNQKKGSKRKNDRGDDHDLKRL
RPSAHTTTRQATKRSAPSAGGKKLVNLRGVRHPSEYKTEDYYDDRKTHSIRAGGAQRGDP
PKTTHLDKPLGRRREPDRQRIKPLMPELTTEKLMRPSEGSVGRVSTSSKEEAEEEASDQE
TGSTAESSEGDRSNMEGEEVMEEEEEEEEEGEKGPEEDEEEEEEEYEQEEGDQRVVNEPP
DYDTRSEASDSQSDSVSFSEGESVHSGSGSDASGSEKKHEKLSSSVRAVRKDQTSKLKYI
LRDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILVFSVRESGKFQG
FARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIHWICRRELPFTKTAHLSNPWNEHKPV
KIGRDGQEIEPGCGMQLCMLFPQDESIDLYQAIHKMRHKRRMPSEPRSRGRPPHREPARG
DLGRRRPEEYDIHNRKRPRIDYPAEFPQRPGFMPVPRNPPVDRRFPTGVRRDVFLNGSYN
DYMREFHHTIGPPPPWQGMAPYPGMEQPPHHPFYQHHPPPPQAHPPYTGHHPVPHDARFR
EKRVVRSFSSTLHDYDMRVDDFLRRTQAVVTGRRSRPRERDRQRERERPRDARRDRDRDR
GRERDRERDRIRDREKERGRYRR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgacagacgagacgacaaagagggagagctcaacgtgctggatgacatcctc
accgaggccccggaccaggatgacgagctctataaccctgagagtgaacaccacgtcaac
cagaagaaaggatctaagaggaagaatgaccgaggggatgaccacgatctgaaacgtctc
cggccctcggctcacaccaccaccagacaggccactaaaagatctgccccctcggctggt
gggaagaaactggtcaacctcaggggggtgcggcacccctccgaatacaagaccgaagat
tattacgacgaccggaaaacccattccatccgagctggtggggcgcagaggggggaccct
cccaaaacaacccaccttgacaagcctctgggccgcaggagagagccagacagacagagg
atcaagcccctcatgcccgagctaaccacagagaagctgatgcgtcccagtgaggggagt
gttggcagggtcagcacctcctccaaggaagaggcagaagaggaggcatcagaccaggag
acaggcagcactgctgagtcctccgagggggaccgatccaacatggagggagaagaggtg
atggaggaggaggaagaggaggaggaggagggagagaagggcccagaggaagacgaggaa
gaggaggaagaagagtatgaacaggaggagggggatcagagagttgtgaacgaaccgccg
gattacgacactcgcagcgaagccagcgactcccagtctgattcagtgtcgttctctgag
ggggagtcggttcactctgggtctggatctgacgcctcaggttctgagaagaagcatgag
aagctatcctcctctgttcgagccgtccgcaaggatcagaccagcaagctgaagtacatc
ctacgagacgcacgcttcttcctgatcaagagcaacaaccatgagaacgtctccctggcc
aaggctaagggggtgtggtccactctgcctgtgaacgagaagaagctgaacgccgccttt
cgttctgcccgcagcgtcatcctggtcttctcagtcagggagagtggaaagttccaaggt
tttgccaggctgtcctcggagtcccatcatggagggtctcccatccactgggtcctgcct
gctgggatgaacgccaagatgctgggtggggtgttcaaaatccactggatctgcagacgg
gagttgccgttcactaaaacggctcacctttccaacccgtggaacgaacacaagcctgta
aagatcggccgagatggacaggagatcgaaccagggtgtgggatgcagctgtgcatgctg
ttcccccaggacgagagcattgacttgtatcaggctattcataaaatgcgacacaagcgg
aggatgccttcggagccgcgttctcgaggacgcccgccgcacagagaacccgcccgaggc
gacctgggaaggcgtcggcccgaggaatatgacattcacaacaggaaacgcccaaggatt
gactatccagccgagttcccacagagaccaggctttatgccagttccacgtaacccgcca
gttgaccggcgcttcccaactggagtaagaagagatgtgtttctcaatgggtcctacaac
gattacatgagagagttccaccacaccattgggccacctcctccttggcaaggaatggca
ccgtaccctgggatggagcagccacctcaccacccgttctaccagcaccatcctccacct
ccccaggcacatcccccgtacactgggcaccaccctgtaccacacgacgcccgcttcagg
gagaagagagtcgtacgttccttcagctctaccctgcatgactacgacatgcgggtggat
gacttcctgagacggacccaagccgtggtgacaggccgtcgcagccgccccagagaacga
gaccggcagagggagcgagaacggccccgggatgcccgccgggaccgcgacagagaccgt
ggacgcgaacgtgaccgagagagagaccggatcagagaccgggagaaggagagggggcgc
tacaggagataa
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integrated database retrieval system
