Oncorhynchus nerka (sockeye salmon): 115125054
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Entry
115125054 CDS
T07952
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115125054 (lsm11)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
115125054 (lsm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
115125054
NCBI-ProteinID:
XP_029510412
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MSAFVLNMEERERRGDKQQKCPESEKKERESTSACASDATEHTAEEEDDIAAKLDITSDK
FDPLLALYSTTVPLPYPNVKCFNNIAEYESFLKGGRGRAKPENVEKKQRKARKGVADPER
IEKLKRLMVNNPIVGEDGEEGTSGTARRCRIQKAAKNVLTRMPLHTGSPLGEMHRCVQER
IRVKVHIRTFKGLRGVCSGFIVAFDKFWNMAMVDVDETYREPLLGEALYHEKALTVTRLF
DKLKLQESAALREYEEKKKQMDKKKAEPFHPPPETQTRDRRRGDPNRGDPRMRGDTRAVD
PRLARATVGPPVGDDPGALGATGKTQGSNVKGQESGTEGPKRRGSQKKEVSQPYGRVHTR
HVNQLFIRGENVLLVNLQPL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttgttttgaacatggaggagagggaaagaagaggagataaacaacaaaaa
tgtccagaatcagaaaagaaagagagagaatcaacaagtgcatgtgcttcagatgcaacc
gaacatacggcagaagaagaagatgatatcgcggcaaagttggacatcacctccgataaa
tttgatccactcctggcgctatactcgactacagtgcctcttccatacccaaacgtgaaa
tgcttcaacaacatagccgagtatgagagctttctaaaggggggacggggccgcgccaag
ccggagaacgtggagaaaaaacagaggaaagccaggaaaggtgtagcagatccggagagg
atagagaaactgaagaggttgatggtgaacaacccgatagtgggagaagatggagaggag
gggaccagcggcactgcccgccgttgtagaatacagaaggctgccaagaatgtcctgacc
aggatgcctctccatacaggaagtcctctgggggagatgcaccgctgcgtgcaggagagg
atcagagtgaaagttcacatcagaaccttcaaggggctccgtggagtgtgttctggcttc
atagtggccttcgacaagttctggaacatggcgatggtagatgtagatgagacctacagg
gaacctctgctgggtgaagctctctaccacgagaaggccctcactgtcacacggctcttt
gacaagctgaaactccaggagagtgcggcgctgagagaatatgaggagaagaagaagcag
atggacaagaagaaagctgaacccttccatcccccgcctgagacccaaaccagagaccgc
agacgaggtgaccccaatagaggggaccccagaatgagaggagacactagggcagtggat
ccccgacttgcaagggccacagttgggcccccagtgggcgatgaccccggagccctaggg
gccacaggtaagacccaggggtcaaatgttaaaggtcaggagtcagggactgaggggccg
aagagaagagggtcccagaagaaagaagtgtcccagccctacgggagggttcatacgcgc
cacgtcaaccagctcttcatacggggagagaacgtgcttctagtcaacctacaaccactc
tga
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