Oncorhynchus nerka (sockeye salmon): 115125126
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Entry
115125126 CDS
T07952
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00260
Glycine, serine and threonine metabolism
one00630
Glyoxylate and dicarboxylate metabolism
one00670
One carbon pool by folate
one01100
Metabolic pathways
one01200
Carbon metabolism
one01230
Biosynthesis of amino acids
one01240
Biosynthesis of cofactors
one04981
Folate transport and metabolism
Module
one_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
115125126 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
115125126 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
115125126 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
115125126 (shmt2)
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
115125126 (shmt2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
115125126
NCBI-ProteinID:
XP_029510487
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MLSLTLRQIARPLCLRAPVALSSVGARRSQHAATRSVEQEAPWTGQDSLAQDDPEMWNLL
RKEKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQ
KRALEAFDLDPALWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPDGGHLTHGYMSDT
KRISATSIYFESMPYKLNPATGLIDYDQLEMTARLFRPKLIIAGTSAYARLIDYARIKKL
CTEVKAYLLADMAHISGLVAAKAVPSPFKYADMVTSTTHKSLRGARAGLIFYRKGVRSVD
KKGKEIQYDLEDRVNFAVFPSLQGGPHNHAIAGVAVALKQAQTPMFREYIGQVMRNSKAM
AEALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALAP
GGLRLGAPALTSRQFKETDFVQVVEFMDEGFKIALDVKKKTGKLADFKNFLLEDPETVSR
MAELKKRVEAFARPFPMPGFEDH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgttgacgttgaggcaaatcgcacggccattgtgcctgcgtgccccggtggcc
ctgagcagcgttggggcgaggaggagccagcatgcggctacccgtagtgtggaacaggag
gccccgtggactgggcaggacagtctggcccaggacgacccggagatgtggaacttgctg
cggaaagagaaggacaggcagtgtcggggactggagctcattgcctctgagaacttctgc
agtcgggctgcgctggaggcccaaggatcctgcctcaataacaagtactcagagggctac
ccaggcaggaggtactacggtggagctgaggtggtagaccagatagagttgttgtgccag
aagagagccctggaggcctttgacctggaccctgccctgtggggggtgaacgtccagccc
tactctggctctcccgccaacttcgctgcctacaccgccgtcctcaaccctcacgaccgc
atcatgggcctggacctgcctgacggtggacatctgacccatggttacatgtctgacacc
aagaggatatctgctacctccatctattttgagtccatgccctacaagctcaatcctgcc
acagggctcattgactatgaccagctggagatgactgcccgtctcttccggcccaagttg
atcattgcaggcaccagcgcctacgctcgcctcattgactacgctcgcatcaagaagttg
tgtacggaggtgaaagcctacctgctggctgacatggcccacatcagtggtctggtggct
gcgaaggctgtcccctcgccattcaagtatgctgacatggtcacctccacaacacacaag
tccctccggggagccagggctggtctgatcttctaccgcaagggcgtgcgttctgtggac
aagaaggggaaggagatccaatatgacctggaggaccgggtcaacttcgctgtgttcccc
tctcttcaggggggaccccacaaccacgccatcgccggggtggctgtcgctctcaaacag
gcccagacgccgatgttcagagagtacataggccaggtgatgcgtaactccaaggccatg
gctgaggccctactgagcaaaggatacaccctggtgtcaggggggacggagaaccatctg
gtgctggtggacctgaggcctaagggcattgatggagccagagcagagagagttttggag
ctggtgtccatcacagccaacaagaacacctgtcccggggacaagagtgccctggcgcct
gggggcctccggctaggtgccccggcgctgacctccagacagttcaaggagactgacttt
gtccaggtggtggagttcatggatgaaggctttaagatcgccctggacgtcaagaagaag
actgggaaacttgcagactttaagaacttcttgttggaggatccagagacggtctctcgc
atggcagagctgaagaaacgagtggaggccttcgcacgtcccttccccatgcccggcttt
gaggatcactag
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