Oncorhynchus nerka (sockeye salmon): 115125180
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Entry
115125180 CDS
T07952
Name
(RefSeq) ARF GTPase-activating protein GIT2-like isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115125180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115125180
Membrane trafficking [BR:
one04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
115125180
Endosome - Golgi transport
Arf GTPase associated proteins
115125180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
GIT_SHD
ArfGap
Ank_2
Ank
Ank_4
Ank_5
Ank_3
TTRAP
DUF7783
Motif
Other DBs
NCBI-GeneID:
115125180
NCBI-ProteinID:
XP_029510540
LinkDB
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Position
LG4:26477986..26496860
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AA seq
750 aa
AA seq
DB search
MSKRLRNNRDCQVCADCSAPGPCWGSVNRGVLVCDECCSIHRGLGRHSSQVRHLTHTPWP
PSQLQMVQTLYSNGSNSIWEHCLLDPSSISSGKRKANPQDRVHPHKTEFIKAKYQMLAYV
HRMPCREDDSVTTKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKA
GQVSQAELLAVYGADPDALDMGGKTPIDYARQAGHQELADRLVEIQYELTDCLAFYLCGR
RPDHRNGQHFIIPQMADRNVSLDLSEFAKAAKKKLQSLTNHQFEELAMDVYDEVDRRETD
AVWLVTQNHGTLVTDTTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILTDAKR
RQRGNSCKSPREDIELILEGINSRHGSDNQDNEDQPDYDSVASDEDPEREPAPGKNGKDG
RTKSSESSDLSDGPITLHEFMEVKSALTASEAKIQQLLKVNCHLSEELQLMQSKLNSLQT
EKSSLRWQTPSGQQHPRDLSGRPPLPGGRPMSMYETGSAMRQYPHRGVPPRRDDSLTVQP
LPTNIGRGPLGNASSSLPTFPSSLSWSRDERARRGCSLEGQSRMLESDYDNTPNHTELEE
SGMGRNSSWLGDSSTAEQGEDETEADSTLPCTEDVICKTEQITKNIQELLRAAQENKHES
FVPCSERIRVAVREMAILFPKRPCSDTVRGSLRLLTSSASRLHGECQKASPHNPCPSDMQ
LVTQQVIQCAYDIAKAAKQLVTVTTKENSN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgtctgcgcaacaacagagactgtcaggtctgcgctgattgtagcgccccg
ggcccatgttggggctcagtgaacaggggtgtgctggtctgtgatgagtgctgcagcatc
caccggggtctgggacgacacagttcccaagtccgacacctgacccatacaccatggccc
ccctcccaactacagatggttcagacattgtacagcaatgggtccaactccatctgggag
cactgccttctggatccctcgtctatctcgagtgggaaacgcaaggccaacccccaggac
agagtccatccccataaaacggagttcatcaaggccaaatatcagatgctggcttatgtc
catcgaatgccctgtcgagaggatgacagtgtcactacgaaggacctcagtaagcaactc
cactccagtgttcggactgggaacctggagacgtgcctgagactgttgtctttgggagcc
caggccaacttcttccacccggaaaaaggaaacactccgctgcatgtagcagctaaggca
ggccaggtgtcgcaggcagagttgctggctgtgtatggggcggatcccgatgccctagac
atggggggtaagacccctattgactacgcaagacaagcaggtcatcaggagctggcagac
agactggtagagatccagtatgaactcactgactgcttggcattttacctctgtgggaga
aggccagatcatagaaacggacagcacttcataattccacaaatggctgaccgaaatgtc
agtctggatttgtcagaatttgcaaaagctgcaaagaaaaaactccagtctctcactaac
catcagtttgaagagcttgccatggacgtttatgatgaagtggacagaagagaaactgat
gcagtgtggctggtgactcagaaccacggcactctggtaacagacacaactgtggtgcct
ttcctccctgtcaaccctgagtactcatccaccagaaaccagggccggcagaaactagcg
aggttcaacgcacatgaatttgcaacactcgtcattgacatattaactgacgccaaacgt
cggcaacgggggaactcctgtaaaagtcccagagaggacatagagctcatcctggaggga
atcaacagccgtcacgggagtgataaccaggataatgaagaccagccagattatgacagt
gtggcgtctgatgaagatccagagcgggaaccagcccctgggaagaatgggaaagatggc
aggaccaagagctccgagtcgtcggacttgtctgatggccccattacgttgcatgagttc
atggaggtgaagagcgccctcacggcctccgaggccaagatacagcagctactcaaggtc
aactgtcacctgagtgaggagctccagttgatgcagagcaagctgaactccctgcagact
gagaagtcctccctgagatggcagacacccagtggccagcagcacccccgggacctctcc
ggccgcccccctctccccgggggccgccccatgtccatgtatgaaacgggctcagccatg
aggcagtatccccacaggggcgtgcctcctcgccgtgacgacagcctcaccgtccagccc
ctccctacaaacattgggaggggtcctttggggaacgcctcgtcctccctccctaccttc
ccctcctccctgtcctggtcgcgggacgagcgagctcgaaggggttgtagcctggaggga
cagagccgcatgctggagagtgactatgacaacacaccaaaccacacagaactggaggag
tctggtatgggcaggaacagcagttggctcggggatagcagtacagcagagcagggggag
gatgagactgaggctgactccaccctgccctgcacagaggacgtcatttgtaagacggag
cagatcaccaagaatattcaggagctgctgagggccgcgcaggagaacaaacatgagagc
tttgtaccgtgctcagaaaggatccgtgtggctgtgagagagatggccatcctgtttcca
aagaggccatgctcagacacagtgcgagggtctctgcggctgctcacctctagtgccagc
cggctccatggggagtgccagaaggcctcgccccacaacccttgcccctccgacatgcag
ctggtcacgcagcaggtcatccagtgtgcctatgacattgccaaggctgccaagcaactc
gtcactgtgacaaccaaagagaacagcaactga
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