Oncorhynchus nerka (sockeye salmon): 115125188
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Entry
115125188 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase 2-like
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115125188
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
115125188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
TAP_C
Motif
Other DBs
NCBI-GeneID:
115125188
NCBI-ProteinID:
XP_029510544
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MSYISKSVSTLEETRTGLCDEFVSVTGSDGAVAQCYLAENDWEMERALNSFFEADMEAVF
TVVDSPKKDTSPPKVKRQKLDKPQGKIDCIDLTTEEPACSSSRAKSTNSSKSVEPKVKVK
TSEEQDDGKLSLISWNVDGLDTVNLGERARGLCSYLALYTPDVVFLQELIEPYVQYLKKR
AVSYTIIEGGEEGYFTGLMLKKSRVKLLNSDIISYPTTQMMRNLLVAQVTFRDQELCVMT
XHFESCKGQAEERMKQLSVVLKRMREAPTNVTVLFGGDTNLRDAEVTMVGGLPGGVCDVW
EQLGKQDHCRYTWDTKANSNKSLPYVSRCRFDRVYLRPAKEGPGSRMTPDHMALVGLEKL
DCGRYTSDHWGIYCSFIL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagttatatctcaaagtccgtgtcgactttagaagaaacgaggactggtctgtgtgat
gagtttgtgtccgtaacaggatccgatggcgccgtggctcaatgttaccttgctgaaaat
gactgggaaatggagagagctctgaactcgtttttcgaggctgacatggaggctgttttt
acagtggtagattcacctaaaaaggacaccagcccccctaaagttaaaagacagaaattg
gacaaaccacaggggaaaatagactgcattgacctgaccacagaagagcctgcctgttcc
agcagcagggccaagtcaaccaactcctccaagtcagtggaacccaaagttaaagttaaa
acctctgaggagcaggatgacggcaaactgtcactgatctcttggaatgtagatggtctg
gacaccgtgaacctgggagagcgtgctaggggcctctgttcctatctggccctgtacacc
cctgacgtggtgtttctgcaggaactcattgaaccgtatgttcagtacctcaagaagcga
gccgtcagctacaccatcattgagggaggcgaggaggggtacttcactgggttgatgctg
aagaagtccagggtcaaactcctgaatagtgacatcatcagttacccgaccactcagatg
atgaggaatctgctcgttgctcaagtgacgttcagggaccaggagctgtgcgtgatgacg
ntccactttgagagctgtaagggacaggcagaggagaggatgaaacagctgagtgtggtg
ctgaagaggatgagggaggctcccactaacgtgactgtcctatttggaggggacactaac
ctgagggacgccgaggtgaccatggttggaggtctgcccggtggggtgtgtgacgtgtgg
gagcagctggggaagcaggatcactgcaggtacacctgggacaccaaggccaacagcaac
aagagtttaccgtatgtcagcaggtgtcgttttgaccgcgtctacctccgaccggccaag
gagggccccgggtcacggatgaccccagaccacatggctctggtgggtttagagaagctg
gactgtggtcgctacaccagtgatcactggggaatctactgcagctttatcctttag
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