Oncorhynchus nerka (sockeye salmon): 115125211
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Entry
115125211 CDS
T07952
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115125211
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115125211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115125211
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
SR proteins
115125211
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
DUF2457
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115125211
NCBI-ProteinID:
XP_029510579
LinkDB
All DBs
Position
LG4:26451426..26455022
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AA seq
252 aa
AA seq
DB search
MTDGRIYVGNLPIDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGGGERGEGGGPKGRFGPPTRRSEFRVIVTGLP
PSGSWQDLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDRTEFRSHQGEMAN
IRVHGEHGASYGRSQSRSRSPRGRGYSPPPYKSRGSPPQRYQSPPRRHVSRHSPPARRHP
VTHHSPPPRHYR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatagacgtccaggagagggacata
gaggatctcttcttcaaatatggaaaaattcgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgaagatccacgggatgcagaagatgctgtctat
ggaaggaatggatatggattcggtgactccaagcttcgtgtagaataccctcgctcctct
ggtgccaaatttagtggccctatgggaggcggagaaagaggcgaaggagggggtcctaag
gggaggtttgggcctccaactcggagatctgagttccgggtgatagtgactggcttgccc
ccatcagggagctggcaggatcttaaagaccacatgcgtgaggcaggggatgtgtgtttc
gccgacgtgcagcgggatggtgaaggggtggtggagtttgtccgtcgggaggacatggag
tatgccctgcgcagactggacaggactgagttccgctcccatcagggggagatggcaaac
attcgtgtccacggagaacatggtgccagttatggtcgctcgcagtcccgctccagatct
ccccgggggcgtggctactcaccacctccttacaaaagcagagggtcccctccacagcgc
taccagtcacctccacggcgccatgtgtcccgccatagccccccagcgaggcgacaccca
gtaacacaccacagcccacccccacgccactatcggtag
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