Oncorhynchus nerka (sockeye salmon): 115125243
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Entry
115125243 CDS
T07952
Name
(RefSeq) UV excision repair protein RAD23 homolog A-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03420
Nucleotide excision repair
one04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115125243
09124 Replication and repair
03420 Nucleotide excision repair
115125243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
one03051
]
115125243
03400 DNA repair and recombination proteins [BR:
one03400
]
115125243
Proteasome [BR:
one03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115125243
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
115125243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
OTU1_UBXL
Exotox-A_target
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
115125243
NCBI-ProteinID:
XP_029510610
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDPDQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKSATAASTPSSEGPKAPVQDSGSSAGPAPAAIPIPPEEPTPTV
AEPPAPASSDPSMEVQGGDASSALVTGAEYETMLTEIMSMGYERERVVAALRASFNNPHR
AVEYLLTGIPSSPVQETNPPAQLPASARTETPTVADGENPLEFLRSQPQFQSMRQVIQQN
PSLLPALLQQLGRENPQLLQQISQYQELFIQMLNEPAGEVGDVPEVGDLGAAVEEGAPVN
YIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQGFEDE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacattaaagacactgcaacagcagaccattcaaatcgacatagacccagat
caaacggtgaaggcactgaaggagaagatagaagcagagaggggaaaagataacttccca
gtgtctggacaaaagctcatatatgctggcaaaatcctgcaagatgacacgcctattaaa
gactacaaaattgacgagaagaatttcgttgtagttatggtatcgaaggcaaagtctgcc
acagctgcatcaacaccttcctcagaaggacccaaggcccctgtccaagactctgggtca
tctgcgggcccggcccctgcagccatccctatccccccagaggagcccacacctacagtc
gcagagcccccagctccagccagctccgaccccagtatggaggttcaggggggagatgcc
tcctctgccttggtgacaggagcggagtatgagaccatgctgacagagataatgtctatg
ggttatgagagggagagagtggtagctgctctccgggccagcttcaacaacccccatcgg
gctgtggagtacctcctcactggcattcctagcagtccggtccaagagactaatccccca
gcacagcttcctgcatctgcccgcacagagacccctactgtagctgatggagaaaaccct
ctggagttcctgcgttcccagcctcagttccagagcatgaggcaggtgatccagcagaac
ccctcactgctgccagctctgctccaacagctgggtcgggagaacccacagctcctacag
caaatcagccagtaccaggagctgttcatccagatgctgaatgagccggcgggggaggta
ggagacgtgcctgaggtgggggacctgggtgctgcagtggaggagggagctccagtcaac
tacattcaggtcacgcctcaggagaaggaagccatcgagaggttaaaagcgttgggtttc
cccgaggcgctggtgatccaggcctactttgcctgtgaaaagaacgagaacctagctgcc
aacttcctcctgaaccagggctttgaggatgaatga
DBGET
integrated database retrieval system
