Oncorhynchus nerka (sockeye salmon): 115125537
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Entry
115125537 CDS
T07952
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome-like
KO
K28154
splicing regulator ARVCF
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115125537
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115125537
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
V-ATPase_H_N
Arm_2
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
115125537
NCBI-ProteinID:
XP_029510922
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All DBs
Position
LG4:complement(27543226..27560992)
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AA seq
898 aa
AA seq
DB search
MPAEVKEEQIPEGPSSLSAITLETKESHVESADDDLNTPTSNSSVVTSTNGSSNAETEAP
QHTEDPKAVELANDQADTPNTPDTPTPQLPPAPQHPPVTQVPMCPDNQSLQPSPLTNVQH
SSEYLTPLITTTATITTLPPPYNNTDRDPNTEIPERENRIYTLPDPPFPVLGGDMCSGYG
SLSRGGVHHSSLHTYWPSRNYQTQPGGHYTLPLPRDNYGQVGLTNQTEGEGPGDAQDVKA
DYPTSSYATLGGIHYLRPITTMELLMEPSRTRGGYEEALMSQVDGDPTSFFQAMSRAQML
QFPHKRCSMVSLDSIRKDPRWRDPNLSEVITMLSHPMDPVKSNAAAYLQHLCYENDHMKQ
DVRQLKGVPVLVGLLDHPKAEVHRKACGALRNISYGKDHHNKVAIKNCDGIPALVRLLRK
SSNMEVRELVTGTLWNLSSHEPLKMMIINHGLQTLTDEVIIPHSGWRRDPTEHSRPQETE
WTTVFKNTSGCLRNVSSDGAEARQRLRECEGLVDALLHALQSAVAHKETDNKSVENCVCI
LRNLSYHVHKEVPGAERFQEPVANQVPGLGGNQKKKKEADCFGGKKPKEEWFSQSWRNGP
SDKKYGTLDLPKRTEPMKGLELLYQPEVVRLYLSLLTCSQNHNTLEAAAGALQNLAAGHW
AWSSYIRATVRKEKGLPVLVELLRSDGDKVVRAVAIALRNLAIDRRNKDLIGSYAMRDLV
SNMPCGQQRPAKNLEGDTVVAILNTIHEIISDSPENARGLIQGHAIQKLVAINKTSQSGR
ETKAASHVLQTVWAYKDLRNSLYKGGWNKSHFKPTTSGMPKKPKSGKSGYDDITLPLMEK
NQDGYSTVEQGDRVGDGPGHMMEREPLQSIPERKHFIRAGRPAVGLVERKPPPLDSWV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagaggtgaaagaggagcagatcccagaggggccctcgtctctgtcggctata
accctggagaccaaggaatcacatgtggagtctgcagacgatgacctgaacactcccacc
tccaactcctctgttgtcacctccaccaatggcagctccaatgcagagacagaggcacca
caacacacagaggaccccaaggctgtggaactggcgaatgaccaggcagacactccgaac
accccagacacacccaccccacagcttcccccagccccacagcatcccccggttacccag
gttcccatgtgtccagacaaccaatctctgcagcccagccccctgaccaacgtccaacac
tcctctgagtacctcaccccccttatcacaaccactgctaccatcaccactctccccccc
ccgtacaacaacacagaccgtgatcccaacacagagatccctgagagggagaacagaatc
tacaccctccccgaccctccctttcctgtccttggaggtgatatgtgttctgggtatggc
agcctgtctcgaggaggtgtccaccatagctccctccacacctactggccctccaggaac
taccagacccagcccggaggccactacaccctgcccctacccagggacaactacggccag
gtgggcctgactaaccagaccgagggggaaggaccaggggacgcccaggatgtaaaagct
gactaccccacctccagctacgccaccctggggggaatccactatctcagacccatcact
accatggagctcctgatggagccgtccagaaccagagggggatacgaggaggccctcatg
tcccaggtggacggagaccccacctccttcttccaggccatgtccagggcccagatgcta
cagttcccccacaagcgctgcagcatggtcagcctggacagcatccgtaaggacccccgc
tggagggaccccaacctgagtgaggtcatcaccatgctcagccaccccatggacccggtc
aagtccaacgccgccgcctacttgcagcacctgtgctacgagaacgaccacatgaagcag
gacgtcaggcagctaaagggggttccagtactggtgggcctcctggaccaccctaaagcc
gaggtccaccgcaaggcctgtggagccctgaggaacatctcctacgggaaagaccaccac
aacaaggtggctatcaagaactgtgacggcatccccgccctggtcagactgctgagaaag
tccagtaacatggaggtcagagagctggtcacagggaccctgtggaacctctcctcccat
gagcctctgaagatgatgatcatcaaccacgggctccagacactgactgatgaggtcatc
atcccccactctggctggaggagagaccctactgagcactccagaccccaggagacagag
tggaccaccgtgttcaagaacacctcaggatgtctcaggaatgtgagctcagatggggca
gaggctcggcagagattgagggagtgtgaggggctggtggacgcactcctccatgccctt
cagtcagctgtcgcacacaaggagaccgacaataagtcggtagagaactgtgtctgcatc
ctgagaaacctctcctaccacgtccacaaagaggtgccgggggcggagagatttcaggaa
cccgtggccaatcaggtgccagggttaggagggaaccagaagaaaaagaaggaggcagac
tgttttggagggaagaagccaaaggaggagtggttcagtcaaagctggagaaatggacca
agtgataaaaaatatggtactctggatttacccaaacgcacagaaccaatgaaaggcctg
gagctgctttaccagccagaggttgtgaggctgtacctgtctctcctcacttgcagtcag
aaccacaacaccctggaggcagcagccggagcgctgcagaacctcgctgcaggacactgg
gcttggtccagttacatccgggccacagtgaggaaggagaaaggtctgcctgtcctggtg
gagctactgcgttcagatggtgataaagtggtccgggctgtagctattgctctccgcaac
ctggccatagatcgtcgcaacaaagacctcatagggagttatgccatgagggacctggtc
agtaacatgccctgtggtcaacagaggccagccaagaacctggaaggggacacagtggtg
gccattctgaacactatccatgagatcatctcagacagccctgagaacgcccgaggtctc
atacagggccacgccatccagaaactggtagccatcaacaagacaagccaatctgggcga
gagaccaaagcagcatctcatgtcctgcagacagtgtgggcttacaaggacctaagaaac
agtctctacaagggaggctggaacaagagccactttaagccaacaactagtggaatgccc
aaaaaacccaagagcggaaagtcaggctatgatgacatcacactgcctctgatggagaaa
aatcaagatggatactccactgtggagcaaggggacagagtgggtgatgggccaggccac
atgatggagagagagcctctccagagtatcccagagaggaagcacttcatccgggctgga
aggcctgcagtgggcctggtggagcgcaaacctccacccctcgactcctgggtctga
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