KEGG   Oncorhynchus nerka (sockeye salmon): 115125624
Entry
115125624         CDS       T07952                                 
Name
(RefSeq) centrin-1-like
  KO
K10840  centrin-2
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    115125624
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115125624
   03036 Chromosome and associated proteins [BR:one03036]
    115125624
   03400 DNA repair and recombination proteins [BR:one03400]
    115125624
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     115125624
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    115125624
   Centrosome duplication proteins
    Centriole replication proteins
     115125624
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      115125624
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 EF-hand_5 AIF-1 EF_EFCAB10_C DUF7645 SRI LETM1_RBD DUF7390 RTP MJ1010-like_2nd
Other DBs
NCBI-GeneID: 115125624
NCBI-ProteinID: XP_029511007
LinkDB
Position
Unknown
AA seq 169 aa
MATSVKRPSLGPVPPPRKKSGPKSELTEELKQEIREAFELFDTDASGHIEVKELKVAMRA
LGFEPKKEEIKRMITEADKDGTGKISFSDFLTVMTQKMAEKDSKEEILKAFRLFDDDETG
KISFRNLKRVAKELGENLTDEELQVRHTPGQHCTHTHTHIHTHTEDDMG
NT seq 510 nt   +upstreamnt  +downstreamnt
atggcaaccagcgtaaagaggccgtccctaggtccggtccctccccccaggaagaagtcc
ggccccaagtcagagctcactgaggagctgaaacaggagatcagagaggcctttgaactg
ttcgacaccgacgcctccggacacattgaagtcaaggagctaaaggttgctatgagggcg
ctggggtttgagccgaagaaagaggagattaagaggatgataacggaggcggataaggac
ggaacaggaaagatctccttctctgattttctcactgtcatgactcagaagatggctgag
aaggattctaaggaggagatcctgaaagcattccgtctgtttgatgatgatgagacgggg
aagatctccttcaggaacctgaagagggtcgctaaggaactgggagagaacctgactgat
gaggaactgcaggtgagacatacacctggacagcactgtacacacacacacacacacata
cacacacacacagaggatgatatgggatag

DBGET integrated database retrieval system