Oncorhynchus nerka (sockeye salmon): 115125725
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Entry
115125725 CDS
T07952
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115125725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115125725
03041 Spliceosome [BR:
one03041
]
115125725
03032 DNA replication proteins [BR:
one03032
]
115125725
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
115125725
Spliceosome [BR:
one03041
]
Complex A
U1 snRNP components
Sm proteins
115125725
U2 snRNP components
115125725
Complex B
U1 snRNP components
115125725
U4/U6.U5 tri-snRNP components
115125725
Complex C
U2 snRNP components
115125725
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
115125725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Kringle
ATP-grasp_2
TSP9
Motif
Other DBs
NCBI-GeneID:
115125725
NCBI-ProteinID:
XP_029511134
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTHRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGGGMGR
GTIFPKRR
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtccattggcgtgcccatcaaagttctgcatgaagcagagggccacattgtgacctgt
gagaccaacactggtgaagtgtacaggggcaagctcattgaggctgaggacaacatgaac
tgccagatgtccaatatcactgtgactcatcgggatggccgtgtagcccaattggagcag
gtctatattcggggcagcaagattcgcttcctgatcctaccggacatgttaaaaaacgcc
cctatgttaaagagcatgaaaaacaagaaccagggctctggagcaggaaggggaaaggcg
gccattcttaaagctcaggtggctgcaagaggacggggtcgtggtggagggatgggaaga
ggaactattttcccgaaaaggcggtag
DBGET
integrated database retrieval system
