Oncorhynchus nerka (sockeye salmon): 115125889
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Entry
115125889 CDS
T07952
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115125889
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
115125889
NCBI-ProteinID:
XP_029511329
LinkDB
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Position
Unknown
AA seq
901 aa
AA seq
DB search
MLWVTLLSTIALGWTTPIPLLEDSEEIDEPCFEPCYCQVKEGVFHVHCDSKGFTNVSQIS
QIWTRPFKLNLQRNSMRKLYVNSFLHLNNAVSINLGNNALQDIHAGAFNGLGILKRLFLH
ENKLEVFRNDTFLGLESLEYLQADYNVIKRIESGAFRHLHKLRVLILNDNLIPVLPCYLF
RSVSLTHLDLRGNRLKTLPYKGTLEYVGRSLMEIQLEENPWICECDIVQLKTWLERIPYT
ALVGEITCEYPFHLHGKDLREIKRSELCPLLSDVEIEVKLGIPRSPFNNENTWPTKPSSM
LSSFHNTASSVEYKERHVKPTKRPRPTKNSPTPRSLYPGQNQPPIAGYQTRPPIPIVCPS
GCMCNLHINDLGLTVNCKEKGFHNISELLPRPLNAKKLYLSGNLIQKIYRSDFWNFSSLD
LLHLGNNRISYVQEGAFINLPNLKSLYLNGNDIERLTPGMFRGLQTLSYLYFEYNVIREI
QPASFSLMPSLQLVFLNDNLLRTLPTDAFAGTSLARLNLRNNYFLSLPVRGVLEHLHSIV
QVDLHQNPWDCSCDIIPLKSWMEKLSSVIMVSDVICKTPDFAFGKDLRSLDAEIICPEMK
YSSGPSPALIPSDDMTTGSSGLGEAGGRGPVPLSVLILSLLVLFISAVFVAAGLFAFVLR
RRKKLPFRKRSEVDLTGIQMQCRIFEDPPRQTSSGSIGSPEKPPSGHTHTHSHTHGHVGH
THSHGHVYDYIPHPVTQMCNNPIYKPREGEIGEQFAETKENNSNYRTLLEKEREWTLAMS
NSQLNTIVTVNHNTGDKSGFHENGGLCPTVIDSQRPKPTVGFVDCLYGTVPKLKDMHVAH
AHPPGMQYPDLQQDARLKETLLFTAGKGCFPDPSQSDYLELRAKLQTKPDYLEVLEKSYR
F
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttaccttgctgagcaccatagccttaggatggaccaccccaatcccactg
ctggaggactcggaggagatcgacgagccctgcttcgagccctgctactgccaagtcaaa
gagggcgtctttcacgtccactgtgacagcaaaggatttacgaacgtcagtcagatctcc
cagatatggacacggcccttcaaactcaacctgcagaggaactccatgaggaagctgtac
gtcaacagttttcttcacctcaacaacgccgtgtccattaatctggggaataatgcgtta
caggacatccacgccggagcatttaacggattgggaattctgaaacggctgttcctgcat
gagaacaaactagaggttttccgtaatgacaccttcctgggtctggaaagcttggaatac
ctgcaggcagactataatgtcatcaagaggatagagagtggagcgttcaggcacctccac
aaactcagagtgctcattctaaatgacaatctgataccagtcctgccctgctacctattt
aggtcggtgtcactaacacacctggacctgaggggaaaccgtttaaagactttaccatat
aagggcacgttggaatatgtggggcggagcctgatggagattcagctagaggagaatcca
tggatctgtgagtgtgatatagttcagctaaaaacatggttggaacgcattccctacaca
gcactggtaggagagatcacctgcgagtaccccttccacttgcacgggaaagatttacga
gagatcaaacgcagtgagctctgtccgttactttcagacgtggaaatcgaggtcaaactg
ggaatcccccggtctccatttaacaacgagaacacgtggccaacgaaaccttcctccatg
ctgtcttcgttccacaacacggcgtcgtctgtggagtacaaagagagacatgtcaaaccc
accaaacggcccaggcccaccaaaaactctcccacccctcgtagtctctaccccggccag
aaccagccccccatagctggctaccagacccgcccccccatccctatcgtctgcccttct
gggtgtatgtgcaacctccatatcaacgacctggggctaacggtcaactgtaaagagaag
ggctttcataatatctcagagctcctgcccaggcccctaaatgccaagaaactttacctg
agcgggaatctaatacagaaaatctaccggtctgatttctggaacttttccagtttggat
ttactacacttggggaataaccgtatatcgtatgtccaggaaggggcgtttatcaacctt
cccaacctgaagagtttgtatctgaatgggaacgacattgagaggttaactcccggtatg
ttccggggcttacagacgttgagttatctttattttgagtataacgtgattcgtgagatc
cagccggcgtcattctctctcatgcccagccttcagcttgttttcctcaacgataacctc
ctccgcaccctcccgaccgacgccttcgcaggcacaagcctggctcgactcaacctccgc
aataactacttcctgtccctgcccgtgcgtggtgttctagaacacctgcattccatcgtc
caggtggaccttcatcagaacccctgggactgctcctgtgacatcatccccctcaaaagc
tggatggagaagctgtcctctgtcatcatggttagtgatgtcatctgtaagactccggat
tttgcctttgggaaggatctgaggtcgctggatgctgagatcatctgtccagagatgaaa
tactcatccggaccctccccagctctcatcccctctgatgacatgaccaccggtagctct
ggtctgggggaggctggggggagggggccggtgcctctatcagtcctcatcctcagtctt
ctcgttctgttcatctcagcggttttcgtggccgcgggcctcttcgccttcgtcctgcgg
agaaggaagaagctgcccttccggaaacgctctgaggtggatctgacgggaatccagatg
cagtgcaggatattcgaggatccgccgagacagaccagcagtggaagcataggctcacca
gaaaagccccccagcggacacacacatacacattcacacactcatggtcacgttggccac
acacacagtcacggtcacgtctatgattacattcctcaccctgtgacgcagatgtgcaac
aaccccatttacaagccccgggagggggagataggggagcagtttgcagaaacaaaagag
aacaacagtaattaccgaaccctcttagagaaggagagagaatggaccctagccatgtct
aactcacagctcaacactatcgtcacggtaaaccacaatacaggggataaatccggattt
cacgagaatggcggactgtgtcccaccgtgattgacagccagagacccaagccgactgtt
ggctttgtagactgtctgtatggaactgtcccgaaactaaaggatatgcacgtggcacac
gcacacccacccggtatgcaatacccggacttacaacaggacgcacgtctcaaggagacg
ttgctgttcacagcgggtaaaggctgcttccctgacccatcccaaagcgattatcttgag
ttaagagccaaacttcaaacaaagccggattacctcgaagtactggagaaatcatatcgg
ttctaa
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