Oncorhynchus nerka (sockeye salmon): 115125911
Help
Entry
115125911 CDS
T07952
Name
(RefSeq) nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
KO
K14416
elongation factor 1 alpha-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115125911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115125911
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115125911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
Motif
Other DBs
NCBI-GeneID:
115125911
NCBI-ProteinID:
XP_029511361
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MSRHRNVRGCNHDEGKLYSCLDQMREVLGDTVPESVLTQVALQCAFDPERALDTILSGES
TGAPPRSAKTHQDAPLPQGANKEGPLPQGANKDVAAAPRSNQEASATPQPKKGACLSNSD
TVLTPTHTPALCPPTDPLNLSDLRARPVKGRCHDTHNLSTSTLNFAAGSARPLATVAEAG
SSSSLAQLMSEHVQKSQRAGLPSLSSSTLAVLSGLSLGTLALLNSNSAPIATSPPNHLAS
SLGSLSLGNPKLTAPGANMAPPSFGSLSSVLQSSRPMEIATGGGAKGADPKGSPSLAELI
QEHSNSSPTLYRTLPGLHGNSSIPIAHGNTAQTAVGPAPALTRSLSQLPQPPGLLNTHCS
PQTQITTTPEPPVLPLSLLASHRQPVSTVPAADPDGQVVPPPGLLGELSPLASQQHNRTS
SDTPPSLSLAALLSPGKPRPRSSQEGGVRDKPRPLLSPTPLSLRPPWGDQSGDLSVLMAQ
SSHGGVLFARRHDKGLSSPSAVALRSDHHRHGSSVFARPSVFALTLSVRAPSRGKRRRRM
MMMKEAVGDLRLEVGGGGGHPAFLYGAQTQLVKAKEQTPLLPITPFTFDTPSPDDVVRAN
QKKAFTRE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgtccgaggctgcaaccacgatgaaggcaagctgtactcctgt
ctggaccagatgcgtgaggtgctgggtgacacagtgccagagtctgtccttacccaggtt
gccttgcagtgcgccttcgaccccgagagagccctggacaccatcctatcaggcgagagc
accggtgctccgccccggtccgctaagacccatcaggacgcaccactgccccagggagcc
aataaggaaggaccactgcctcagggagccaataaggacgtggcagctgcaccaagatcc
aatcaggaggcatcagccaccccacaaccaaagaaaggagcctgcctatccaactctgac
actgtactcacaccaacacacacaccagctctatgtccacctaccgatcctctgaacctt
agtgacctccgagcgcggcctgtgaaaggtcgttgtcatgacactcacaacctctccact
tcgactctgaatttcgcggcgggttccgcaaggcccttggcgacggttgccgaggcgggg
agcagcagcagcctggcccagttgatgtctgagcatgttcagaagagtcagagggcggga
ctcccctcactgtcctcatctactctggctgttctttctggcctctcattgggcactcta
gcgttgttaaactccaactccgcccccattgctacaagtccccccaaccaccttgcctcc
tctttgggtagcttgtccttaggcaaccccaaactgacagctccgggtgccaatatggcc
cctccctccttcggcagcctgagctccgtcctccagagcagccgaccaatggagatagcc
actgggggaggggctaagggggcggatcccaaaggaagcccgtcattggctgagctgatc
caggaacattccaacagcagccccaccctctacagaacactccccggtctccacgggaac
agctcaatccccattgcccacggcaacacagctcagaccgccgtcggaccagcgccagct
ctcacacgctccctgtcccagctcccacaacccccaggacttctgaacacacactgttcc
ccccagacccagatcacaacaacaccagaacctcccgtcctccctctgtctctgttggcc
tctcaccgtcagccagtaagcacggtgccagcagcagacccagacggacaggtagtacca
cctcctggcctactgggggagctctctccactagcctctcagcaacacaacagaacttcc
tccgacaccccaccatcactctccctcgccgcgctcctgtcaccagggaaaccacggcca
agaagtagccaagagggtggagtcagagacaaaccccgcccccttttgtcacccactccc
ctgagtctccgcccaccatggggtgatcagagtggtgatctaagcgtgctcatggcccag
tcgtcccacggtggagtgttgttcgcacgtcgccatgacaaaggcctctcctcgccgtcc
gcggtcgccttgaggtcagaccaccaccgccacggttcctctgtgttcgctcgaccgtcc
gtcttcgccctgaccctgtcggtgcgtgcgcccagccgggggaagaggaggaggaggatg
atgatgatgaaggaggctgtgggagatctgaggttagaggtcggaggaggaggaggtcac
ccggcgtttctgtacggagcacagacccagctggtcaaagctaaagaacagacgcccctc
ttacccataacccctttcaccttcgacactccctcccccgacgacgtcgtacgagccaat
cagaagaaggccttcacccgcgagtaa
DBGET
integrated database retrieval system
