Entry |
|
Symbol |
ndc1
|
Name |
(RefSeq) nucleoporin NDC1 isoform X1
|
KO |
|
Organism |
one Oncorhynchus nerka (sockeye salmon)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:one00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115126031 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:one03019]
115126031 (ndc1)
Messenger RNA biogenesis [BR:one03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115126031 (ndc1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
344 aa
MHVPRLYEKLHRSGIFSRILTTSWHNFFFFKHFFFLQSDLKSLYRNKMFSSDESCWFVRK
VICWRAVASMAWSVLLLLPTTALFVLLSRFSLFHPILWISECLSLLTSASAIFSFILLCG
VVLMVGFFNLEYYTVVPSIACSKIALLGQVLHPRQFVHSLVHCIMGVVVAWCCAFTIGGR
YRSLGHPCTQDESSSGPEMCLNEYHLVLLLVGAFIGYSHSLVGVVYNMNYVSFHTMQQYK
YLRFKGALPLVVKASAVQALYCLRSFLLLYFFMGYAPRAWICKTLDLNINSSIHSLDSVS
SLLDLSLLYHLWISGTFLLLTWYITVLLFRIFVTEVHITPLTPL |
NT seq |
1035 nt +upstreamnt +downstreamnt
atgcatgtgccgcgcttatacgagaaactgcacagaagtggaatattctctaggattttg
acaactagctggcataatttttttttttttaaacacttcttttttttgcagtcggatcta
aaatctttatatcgaaacaaaatgttttcatcggatgaaagttgttggttcgttcgtaag
gtgatttgttggagagcagtagccagtatggcgtggtctgtcctgctgctgctgcccacc
acagctctgtttgtacttctcagcagattcagtctgtttcacccgatactctggatatca
gaatgcctgtcccttttgaccagtgccagtgccatcttctccttcattctgctatgtgga
gtggtattgatggtgggcttcttcaacctggagtattacacagtcgtcccatccatcgcc
tgttccaagatcgccctcctgggtcaggtgctccacccccgtcagttcgtccactcactg
gtgcactgcatcatgggtgttgtagtagcgtggtgttgtgccttcaccatcggagggcgc
tacaggtccctcgggcacccctgtacacaggatgagagtagtagtggtcctgagatgtgc
ctgaatgaataccacttggtgctgctgctcgtgggggccttcattggctacagccacagc
ctggtgggagtggtctacaacatgaactacgtttctttccacaccatgcagcaatacaag
tacctccgcttcaagggagctctgcctctggtggtgaaggccagtgctgttcaggctctc
tactgtctcaggagcttcctcctgttgtatttcttcatgggatatgcaccacgagcctgg
atctgtaaaacccttgacctcaacatcaacagttcaatccattccctggacagtgtgtct
agtctattggacctgtccctcctgtaccacctgtggatcagtgggaccttcctcctcctc
acctggtacatcacagtgctgctcttcaggatctttgttaccgaggtacatataactccc
ctgacccctctataa |