Oncorhynchus nerka (sockeye salmon): 115126031
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Entry
115126031 CDS
T07952
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115126031 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115126031 (ndc1)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115126031 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
115126031
NCBI-ProteinID:
XP_029511475
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MHVPRLYEKLHRSGIFSRILTTSWHNFFFFKHFFFLQSDLKSLYRNKMFSSDESCWFVRK
VICWRAVASMAWSVLLLLPTTALFVLLSRFSLFHPILWISECLSLLTSASAIFSFILLCG
VVLMVGFFNLEYYTVVPSIACSKIALLGQVLHPRQFVHSLVHCIMGVVVAWCCAFTIGGR
YRSLGHPCTQDESSSGPEMCLNEYHLVLLLVGAFIGYSHSLVGVVYNMNYVSFHTMQQYK
YLRFKGALPLVVKASAVQALYCLRSFLLLYFFMGYAPRAWICKTLDLNINSSIHSLDSVS
SLLDLSLLYHLWISGTFLLLTWYITVLLFRIFVTEVHITPLTPL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgccgcgcttatacgagaaactgcacagaagtggaatattctctaggattttg
acaactagctggcataatttttttttttttaaacacttcttttttttgcagtcggatcta
aaatctttatatcgaaacaaaatgttttcatcggatgaaagttgttggttcgttcgtaag
gtgatttgttggagagcagtagccagtatggcgtggtctgtcctgctgctgctgcccacc
acagctctgtttgtacttctcagcagattcagtctgtttcacccgatactctggatatca
gaatgcctgtcccttttgaccagtgccagtgccatcttctccttcattctgctatgtgga
gtggtattgatggtgggcttcttcaacctggagtattacacagtcgtcccatccatcgcc
tgttccaagatcgccctcctgggtcaggtgctccacccccgtcagttcgtccactcactg
gtgcactgcatcatgggtgttgtagtagcgtggtgttgtgccttcaccatcggagggcgc
tacaggtccctcgggcacccctgtacacaggatgagagtagtagtggtcctgagatgtgc
ctgaatgaataccacttggtgctgctgctcgtgggggccttcattggctacagccacagc
ctggtgggagtggtctacaacatgaactacgtttctttccacaccatgcagcaatacaag
tacctccgcttcaagggagctctgcctctggtggtgaaggccagtgctgttcaggctctc
tactgtctcaggagcttcctcctgttgtatttcttcatgggatatgcaccacgagcctgg
atctgtaaaacccttgacctcaacatcaacagttcaatccattccctggacagtgtgtct
agtctattggacctgtccctcctgtaccacctgtggatcagtgggaccttcctcctcctc
acctggtacatcacagtgctgctcttcaggatctttgttaccgaggtacatataactccc
ctgacccctctataa
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