Oncorhynchus nerka (sockeye salmon): 115126125
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Entry
115126125 CDS
T07952
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115126125
Membrane trafficking [BR:
one04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
115126125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_9
TPR_1
TPR_2
SH3_2
SH3_1
TPR_8
TPR_MalT
TPR_5
Motif
Other DBs
NCBI-GeneID:
115126125
NCBI-ProteinID:
XP_029511577
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MAWCCCTPLRASSSSCCSPLLKHCPLFPDISPAELDALWREPPYTLAGTNGHFTGNDVRN
RGEEEGPGVESGEGEAELDSYWTRKEAFTRGSTVSLAVGERFSSDVVLVFSGRRCSGVIP
DSELQEALRTRLRVVESNSQDVIQLFKDLSARLLSVHAEKDSFVITFKTVEEIWKFSTYL
ALGYVARCLENFLCDQSFWLDTELLRDLEITVTVDEEHLATLYLGLLLQEGSFFAKALVS
SGEHSDEEEELCFRRNDLLMVRDTGQDSHWEGTLLSTGQHGLVPVNTMQPLPYPFYQWFL
RKYSDCAGCSPSERGQFDHPIVTGSCEAVVDHNPVGSDELQLSQGDLIEIQGMLLRGLDL
FIGTHCSTGNTGFVHKAHVKPLNAKPPDRQLCFLSEEERASMAQINPCSSEPRDSGLLER
LFSSDISTVYRLDRLDQSDFTYIRNQPKQEHKPPASARQSIISEKSDATPPYHSSPRPSL
SHSSPRPSFYASQNALGRGGDGELLSFSLDDTFREMNEFQEDPPLFLEEGSWEGVESEVC
DPTLTLLNMHHFQEDFLPLYDLNHSFLWLTFSGQSEDELLGHLEIVREGAKRTGMAWAHR
RACFLLGRLCAKKLKYSQARVYYEEALGVSVDGFSDLPLLIALYTNLTAIYLKQKMADKL
PPTLEKASALLLCLPRHTFTSLDEFELLMLVLRRSVVEGDKHLEARVCYLTASLFLLLRK
IDDALPFAERLQFLTVTLSAEEGRPIAPLDLNWLLSRLYHRKYMPYLALASLSLDSGQEY
SLQDAFHRIELFSRNSVRLNPRWKEGTSLLPAQIVVYLQQALAIAERSEDLKTQRDLCLG
LACVYQQHGALVKALPCAQQAVQTGGGINEEEGFEASVLLGWLLVLTGEPERGQHTLQPL
LQSLQGTDSPTQRGVVHNLLALCLRRQGRIAEAGSHLHHALTISRESGNQRNQALALANL
GCLALGVGAPTLAERFLFRSARRE
NT seq
2953 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtgctgttgcactcctctccgggcctcctcgtcctcctgctgctctccgctt
ctcaaacactgccctctcttcccagacatctcccctgctgagctggatgcactatggagg
gaaccaccgtacacgctagcgggaaccaatggtcacttcacaggaaatgatgttaggaat
cgaggggaggaggagggtccgggggtggagtctggggaaggggaggcggagctggacagt
tactggacaaggaaggaggcgttcaccagaggaagcaccgtgtcactggctgtgggagag
aggttctcctcagacgtggttctagtgttcagcggtcggcggtgctcaggtgtaatacct
gactctgaactacaggaggcgctccgtacaagactcagggtcgtcgagagcaacagtcag
gacgtcattcagctcttcaaggacctgtctgcccgtctgctgtctgtccacgctgagaag
gacagctttgtcattaccttcaagactgtagaggagatctggaagttctctacctacctg
gctctgggctatgtggcgcggtgcctggagaatttcctgtgtgaccagtcgttctggctg
gacactgagctgctgagggacttggagatcactgtgactgtagacgaggaacacctggca
acactctacctgggactgctgctgcaggagggttcgttcttcgccaaggcgctggtgagc
agtggcgagcatagtgatgaggaagaggagttgtgtttcagacgtaacgatttgctgatg
gttagagacacggggcaggacagtcactgggagggcacccttctctccaccggacaacac
ggactagtgcctgtcaacaccatgcagccgctgccataccccttctaccagtggtttctg
aggaagtactctgactgtgccggatgctccccttcagagagaggacaatttgaccaccct
atagtaaccggatcctgtgaggctgtagtggaccacaacccagtaggttctgatgagctc
cagctgagtcaaggtgacctgattgagatacaggggatgctactccgaggtctggacctg
ttcataggaacacactgctctacaggaaacaccggcttcgtacacaaggctcacgtcaag
ccactcaacgccaaacccccagacagacaactgtgttttctgagtgaggaggaacgtgcg
tcaatggcccagattaacccctgcagtagtgaacccagagacagcggcctcctagaaaga
ctcttctcctctgacatcagtactgtctacagactagatagactggatcagtctgacttt
acgtacatcagaaaccaaccaaaacaagagcataagccccccgccagcgcccggcagtcc
atcatctcagagaagagtgacgctacacccccctaccactcctccccccgcccctctctc
tctcactcctcgccccgcccctccttctacgcctcccagaatgctttggggcgtggcggt
gacggggagttgctgtccttcagtctggacgacaccttcagagagatgaatgagttccag
gaagacccaccccttttcctggaggaggggagctgggagggggtggagtcagaggtctgt
gacccaaccctgactctgctcaacatgcatcacttccaggaggacttcctgcccctctat
gacctaaaccactccttcctgtggctgacgttctcaggacagagtgaggatgagttactg
ggccatctggagattgtcagggagggggctaagagaacgggcatggcctgggcacaccga
cgggcatgcttcctactggggaggctctgcgccaagaagctcaagtactcccaggcccgt
gtgtattacgaggaagcccttggcgtctctgtggacggtttctctgacctccctctcctc
atcgccctctacaccaacctcacagccatctacctcaaacagaaaatggccgacaagctg
cccccgaccctggagaaggccagtgctctgctcctctgtctccccagacacaccttcacc
tccctggatgagtttgagctgctgatgctggtgctgcggaggtctgtggtggaaggggac
aaacacctggaggcacgggtctgttacctcaccgccagcctcttcctcctccttagaaag
atagatgacgccctgcccttcgcggagcgcctccagttcctcaccgttaccctgtctgct
gaggaggggcgccccatcgcccccctggacctcaactggctcctgtcccggctctaccac
cgtaaatacatgccctacctggccctggcatcactcagccttgactctggacaggagtac
tcactacaggacgccttccacaggatagaactgttcagcaggaactcggtgcgtctgaat
ccgcgatggaaagaggggacgtctctcctccccgcccagatcgtggtgtatcttcagcag
gctctggccattgcggagcggagtgaggaccttaagacccagagggacctgtgtctgggc
ttggcctgtgtgtaccagcaacacggcgccctggtgaaggccctgccctgtgcccagcag
gctgtacagaccgggggaggtatcaacgaggaggaggggtttgaggcttcagtactgctg
ggatggttgttagtcctgacgggagagcctgagaggggacagcacaccctgcagccacta
ctgcagtctctacagggaaccgacagcccgacccagaggggagtggtccacaacctgctg
gctctgtgtctgcggcgacagggtcgcatcgcagaggccggaagccacctacaccacgcc
ctcaccatctccagggagagtggcaaccagaggaaccaggccctggccctcgccaacctg
ggctgcctggcactgggcgtgggggcacccacactggcagaacgattcctattcaggtca
gcaaggagggagg
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