Oncorhynchus nerka (sockeye salmon): 115126135 Help Entry 115126135         CDS       T07952                                  Name (RefSeq) collagen alpha-1(IV) chain-like   KO K06237   collagen type IV alpha Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04382   Cornified envelope formation one04510   Focal adhesion one04512   ECM-receptor interaction one04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:one00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115126135  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115126135   09142 Cell motility    04820 Cytoskeleton in muscle cells     115126135  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     115126135  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:one04147]     115126135    00536 Glycosaminoglycan binding proteins [BR:one00536]     115126135 Exosome [BR:one04147]  Exosomal proteins   Exosomal proteins of other cancer cells    115126135 Glycosaminoglycan binding proteins [BR:one00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115126135 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 FeoB_associated Motif Other DBs NCBI-GeneID:  115126135 NCBI-ProteinID:  XP_029511629 LinkDB All DBs Position LG1:24169665..24246303 Genome browser AA seq 1642 aa AA seqDB search MMVHSGTLVLLVAVSYTIFRTEAKGCSGSSCGGKCDCSGVKGEKGERGFPGLQGNMGFPG MQGNEGPAGPMGPKGEYGESGTPGMKGTRGSNGLSGFPGNPGLPGIPGQDGPPGSSGIPG CNGTKGDRGTDGQPGFPGLQGPPGIPGLMGMKGDPGGVLGIIPLKGDKGFPGTPGLPGPN GPSGPEGPPGNQGSDGPRGFPGIPGPPGEKGDRLSFQSEKGDKGAQGLRGPPGPPGLPSQ EAGGNTVTHFLPGPPGQRGETGDRGDKGSCILNGVKGEQGSPGPRGKPGKDGDNGFKGER GFPGGPGYHGTPGEKGEKGPPAYVDSAPGSPGPPGLPGLQGERGFPGLQGDLGPPGSLIE GPPGEKGQPGEIGQKGDRGADGDSLTGKPGHDGSVGPPGPPGPPGDEPCDPALEKGPPGP PGPPGLQGELGQKGDQGDTCVQCEAFGPPGLPGPQGPKGLQGYPGAAGTKGDTGLPGPTG PDGSPGNYGTPGLIGAPGAHGEPGDIYVASGLKGDKGGSGFVGTRGLPGVDGLPGKAGLP GLPGPKGEPAQDGIKGDRGLDGEHGITGPPGERGPPGVPGFGRQGEPGEKGTSGQGGRPG IPGQPGVKGEPGKGVSSPGPQGTPGPRGESGIRGLQGDRGPHGDPGIPGFPGQKGDTGAP GMGFSGPPGPKGYSGAPGATGLPGEPGRPGQDGFSGISGTPGPKGEPGRGLPGPKGAQGP AGVTGFPGEKGNLGLPGIPGQEGHTGPPGAQGIKGDHGPPGQHGGTGPPGPPGAGEPGAP GPMGPPGESGLFGHDGVKGDKGLPGSPGLDMPGPQGEKGDSGLPGLSGSKGFPGRTGPAG RDGFPGGAGPKGEMGVMGTPGTPGYQGPSGNPGSPGLRGDPGISGPRGEFGENGPKGERG EPGLQGPAGNMTDVDMEHMKGEKGDLGDPGDPGYTGEKGYPGQPGVPGMPGKDGEPGTPG QPGDKGETGFPGEPGSIGYPGNKGGIGEMGYPGSLGTKGDKGIVGTPGHPGFRGTEGVKG DKGQTGLPGVGVPGPSGEKGQLGLPGFPGNAGEKGQKGGMGVPGMPGTPGTKGDTGHIGY QGQPGQPGEKGIGGLPGSPGEPGQTGRPGEPGLQGPPGTTGEKGASGVDGIPGSSGERGD TGLPGRGFSGTPGSSGDKGDKGSPGFPGSPGIPGIPGTRGDKGIPGFEGSHGQPGERGLP GPAMEGPKGDQGVSGKPGEPGTSGAPGPAGVPGSVGGKGDKGDQGEPGVHGEQGFKGDQG YPGLSGQAGLPGVDGLKGEMGLQGVPGFPGTKGEFGVVGFKGELGDRGFPGDKGNDGPPG PPGPHIFIKGDSGFPGNQGPQGPVGPSGIPGLKGQQGVTGIQGIKGDEGNPGFNGLPGAK GEPGLLGPSGPRGYPGPPGPDGVPGQVGPPGPSSMEHGFLVTRHSQSVEVPHCPEGTSVI YDGYSLLYIQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPE PMPMNMAPITGQSIKPFISRCSVCEAPAMVIAVHSQNIMIPSCPNGWDSLWIGYSFVMHT SAGAEGSGQALASPGSCLEEFRGAPFIECHGRGTCNYYANSYSFWLATIEDEEMFTKPVP TTQKAGNLRSNISRCQVCMKRT NT seq 4929 nt NT seq  +upstreamnt  +downstreamnt atgatggtccatagtggtacgctggttctgttggtggctgtatcctacactatatttcgg acagaggctaaggggtgttctgggtcatcgtgcggtggaaaatgtgactgcagtggagta aaaggagaaaagggtgagcgggggtttcctggtctccaaggcaacatggggttcccgggc atgcagggcaatgaggggcccgccgggccgatgggccctaagggagaatatggcgagtct ggaactcctggaatgaaaggaacacgtggatctaatggtttgtcaggcttcccaggaaat ccagggctaccgggtatccccggacaagacggcccccctggatcgtcaggtatcccaggg tgcaacggaacaaagggagatcgagggacagatggacagcctgggttccctggtctacag ggtcctcctggtatccctgggctaatgggaatgaaaggagacccaggtggtgttttagga atcatcccactgaaaggagataaaggattccctggaacacctggtttaccgggacctaat ggcccctcaggacccgaaggccccccaggaaaccagggatcagacggacccagaggtttc cctggcatacctggccccccaggagaaaagggtgaccggctgtcattccagagtgagaag ggagacaagggtgcacaagggctccgtggtccccctggcccccctggactcccgtcacag gaagcgggaggaaataccgtcactcatttcctccctggaccaccgggtcagagaggcgag acaggagacagaggagacaaaggttcttgcattctaaacggggtcaagggtgaacaaggc tcaccaggaccaaggggaaaacctggcaaagatggcgacaatggatttaagggagagaga ggctttcctggcggccctggataccatggaacaccgggtgaaaaaggagagaaaggacct ccagcatatgttgatagtgctcctggctctcccggcccccctggtctcccgggattacaa ggagaaagaggtttccctggtcttcaaggagaccttggtccaccaggcagtcttattgaa ggacctcccggagagaagggccaaccaggagagattggtcagaagggagacaggggtgca gatggggactctctcacaggaaagcctggacacgatggatccgtcggaccccctggtcct cccggacctcctggtgatgagccatgtgatccagcccttgagaagggaccacccggaccc cccggcccaccaggactacagggggagttgggacagaaaggtgatcagggagacacgtgt gtgcagtgtgaagccttcgggccccctggactccctggtccacaggggcctaaaggactg caaggatatcctggagcagcaggcactaaaggagacacgggcctgcctggacctactggg cctgatggaagccccggtaattacggtactcctgggttgatcggggctccaggagcccat ggtgagcctggagatatctacgtggcttcagggctgaagggtgacaaaggagggtctggc ttcgtgggcacacgaggactgccaggtgtggatggactgccagggaaagctggactaccc ggcctgcccggacccaaaggagaacctgcccaagatggcatcaagggggaccgtggtctg gatggggaacatgggatcactggacccccaggagagaggggtcctcctggtgtaccaggg tttggccgacagggggagcctggagagaagggtacatctggccaaggaggccgacctgga atccctggacaaccaggagtgaaaggtgaaccaggaaaaggtgtgagttcacctggaccc cagggcacccctggacctcgaggagaatctggcatacgtggactacaaggtgaccgagga cctcatggagacccaggaattccaggattcccaggacagaaaggtgacacaggtgcacct ggcatgggattctcaggaccacctggacctaaaggatattctggagctccaggagccact gggttgccaggagagcctggaagacctggacaggatggtttctctggaatatcgggcaca cctggtccaaagggtgagccaggtaggggtctacctggacctaaaggtgctcagggtcct gccggagtgacaggtttccctggagagaaaggcaaccttggtctacctggcattcccgga caagagggacacacaggaccacctggagctcagggcatcaaaggtgaccacggcccccct ggtcagcatggtggcacaggaccccctggaccccctggagcaggagaacctggtgcccct ggacccatgggaccccctggagagtcaggcctcttcggtcatgatggtgtgaagggtgat aagggtttgcctggctctcctggtctggacatgcccggccctcagggagagaagggagac tcaggattacctggactttctggttccaaagggtttccaggacgaacaggccccgccggc agagatggattccctgggggggcaggccccaagggagagatgggagtcatgggaacacct ggaacaccaggatatcagggtccatctgggaaccctggaagtccaggactgagaggtgac cctggtatctctgggccaaggggggagttcggtgagaatggacccaaaggagagagggga gagccaggtctccagggccctgctggcaacatgactgacgttgacatggagcacatgaag ggcgagaaaggagacctcggggatccaggtgaccctggatacacgggagagaagggttat ccaggacagcctggagtacctggtatgccaggaaaggatggagagcccggtacacctggt cagccaggtgataaaggggagacaggttttcctggagagcccggcagtattggatatcct ggaaataaaggaggcattggcgaaatgggatatccaggttctctaggtacgaagggtgat aaaggcattgtgggcacaccgggtcatccagggttcaggggtacagagggggtgaaggga gacaagggacaaaccggtctgccaggtgttggagtaccaggaccctctggagagaagggt cagttgggtctgcctgggttccctggtaacgcaggagagaagggtcagaagggaggaatg ggagtgcccgggatgccaggaacaccaggaaccaagggagacactggacacatcggttac caaggtcagccgggtcagccaggagagaagggtattggtgggcttcctgggtcaccagga gagccaggtcaaacaggtcgaccaggtgagcctggtctgcagggtccaccaggtacaacc ggagagaaaggagcgtcaggagtggacggcatacctggatcatcaggagagagaggagac acaggtttacccggcaggggcttctcagggacaccagggtcgtctggggataaaggtgac aaaggctctccaggtttcccaggctctccaggtatcccgggtatcccagggaccagggga gacaagggtattccaggctttgagggttcccatggccagccaggagaacgtggtctccca ggacccgccatggagggtcccaaaggagaccaaggagtgtcaggaaagcctggagaacca ggtaccagtggtgctccaggtcctgctggtgttccaggcagtgtggggggaaagggagac aaaggggaccagggtgaaccaggagtacatggggagcagggtttcaaaggagatcaagga taccctggactttctggtcaagctggccttccaggtgttgatggactgaagggagagatg ggactgcagggagtgcctggtttcccagggacaaagggtgaattcggagtggttggattc aaaggagagctgggggacagaggattcccaggagacaaaggtaatgatggtccccctggt cctcctggcccccacatcttcatcaagggagacagcggcttccctggtaatcagggccct caggggcctgtggggccctcgggtatccctgggctgaaaggacagcaaggtgtgacaggt attcagggtattaaaggtgatgaggggaacccagggtttaatggtctccccggcgccaag ggagaaccaggcttgcttggtccctcaggacccagagggtaccctggacccccaggacct gatggtgttccaggtcaggtgggtcctcctggcccctcctccatggaacatggtttcctg gtaaccaggcacagccaatcggtggaggttccacattgtcctgagggaacgtcagtgatc tatgatggatattccctactctacatccagggcaacgagcgctcccacggccaggacctg ggtacggctggtagctgtctaaggaagttcagtcccatgcccttcctcttctgtaacatc aacaacgtctgtaactttgcctcccgtaacgactactcctattggctcacctcccctgag cccatgccaatgaacatggcccctatcactggccagagcatcaagcccttcattagcagg tgttcagtgtgtgaggctcctgccatggtgatagcagtgcacagtcagaacatcatgatc ccatcatgccccaatggctgggactcactctggattggctactccttcgtcatgcacact agtgcaggtgctgagggctctggacaggcactggcatctcctggctcctgtctagaggag ttccgtggcgctccgttcatcgagtgtcacggccgtggaacctgcaactactacgccaac tcctacagcttctggctggccaccatcgaggacgaggagatgtttacgaaacctgtgccc accacacaaaaggcaggaaatctccggagtaacattagccgttgccaggtgtgcatgaag aggacatag

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