Oncorhynchus nerka (sockeye salmon): 115126344
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Entry
115126344 CDS
T07952
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115126344
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115126344
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115126344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
HA2_N
Motif
Other DBs
NCBI-GeneID:
115126344
NCBI-ProteinID:
XP_029511818
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MLPSASLVNSVLVHSRFCTDALLLREMMSDPMLEHYGAIVIDQAHERTVSTDILLGLLQD
ILVHRPDLRVVILTVSSMTDRLLAHYGSNVPVVSLEALCPAEVVYSNCSSKDYFYSALRL
VLEIHRSKEEGDVVLFLASAQEVVCARAILQREGTRLGADLGELVPVVLCPGQGRTPSLL
GEGTGSRGTVTTRCRRVFLSTSQGEDMFWAVDSVNFVIDVGLEKRHVYHPRLRANSEVLR
SISRYQADIRKQLTGPTGKCFCLYPEERVLPVETSPQILDANLTFTILFLKRMEIAGLRH
CDFITRPDPEGLMQSLEELDYLAALDDDGNLSEIGIIISELPLDAQMAKALLASCEFDCV
NEVVTIAAMLSAPSCFLEPPVGRTQEVQQCHRKFRHPEGDHFTLINIYNAFKYSQRETYF
SVEKWCQDYHLNHRALQTADAIRSELTDILKRIELPISETSFGTKTNTLNIKRALLAGFF
MQIARDVDGSGNYFMLTNRHMAQVHPASSYGAKAHQLGFPEWVLFHEYTLSGNHGIRTVS
EISPAVFIQTAPQYFYYNLPPSESKDLLQHILDRDGSGRQDKQQTLTINSKADKDCSTVA
QSYDRCVLQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgttaccatctgcatccttagttaactcagttctggtccactccaggttctgtacagat
gccctgctactgagggagatgatgtctgaccccatgttggagcactacggggccatcgtc
atcgaccaggctcatgagagaaccgtcagcacagacatactgctgggactgctccaggac
atcctggtccatagaccagacctgagggtggtgatcctgactgtgtcctccatgacagac
aggctcctggcccactacggtagtaacgtccctgtggtcagtctggaagccctctgtcca
gctgaggtggtctacagtaactgtagcagtaaagactacttctactctgctctgagactg
gtactggagatccaccgctccaaggaggagggagatgtggtgctgttcttggcctcagct
caggaggttgtctgtgcccgtgctattctccagagagagggaaccagactgggggcagac
cttggggagctggtgcccgtggtcttgtgccctgggcagggtcggacaccctctctcctg
ggggaagggacggggagtaggggaaccgttacgaccaggtgtcggagggttttcctctcc
acaagccagggagaggacatgttctgggctgtggactctgttaactttgtcatcgacgta
ggactggagaaaagacatgtgtatcatcccaggttaagggccaactctgaagtactacga
tccatcagcagataccaggctgatatcaggaagcagctgactggaccaacagggaagtgt
ttctgcctgtaccctgaggagagagtactccccgtagagacatcccctcagatcctggac
gccaacctcaccttcaccatcctcttcctcaagaggatggagatcgcagggctgagacac
tgtgacttcatcaccagaccagatccagagggtctgatgcagtcgctagaggagctggat
tacctcgcggcattggacgacgatgggaacctatcagagatcgggatcataatctctgag
ttgccattggacgctcagatggccaaggctctgctggcgtcctgtgagtttgattgtgtg
aacgaggtggtgaccatcgcagctatgctatcagcgccaagctgcttcctggagccacct
gttggcaggacccaagaggtacaacagtgtcacagaaagttccggcaccctgagggagac
cacttcaccctcatcaacatctacaacgccttcaagtacagccagagagagacatacttc
agcgtagagaagtggtgtcaggactaccatctgaaccaccgcgcccttcagacggcagac
gccatcaggtcagagttgactgacatcctgaagagaatagagctgcccatctccgagacg
tccttcggaaccaagaccaacacactcaacatcaagagagctctgctggcagggttcttc
atgcagattgcccgtgatgtggatggctcaggaaactacttcatgttgaccaacagacac
atggctcaggtccaccctgcctccagctatggggccaaggcacatcaattgggttttcca
gagtgggtgctgttccatgagtatactctctcgggaaaccacggtatccggacagtctct
gaaatctcccctgcagtgttcatccagacggctcctcagtatttctattacaacctgcct
cctagtgagagtaaagacctactacagcacattctggaccgggacggatctggacgtcaa
gacaagcaacagaccctgacaatcaacagcaaagcggataaggactgcagtaccgtggct
cagtcttatgacagatgtgtgctacagtga
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