KEGG   Oncorhynchus nerka (sockeye salmon): 115126485
Entry
115126485         CDS       T07952                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31A-like
  KO
K14005  protein transport protein SEC31
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115126485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115126485
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:one02044]
    115126485
Membrane trafficking [BR:one04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    115126485
Secretion system [BR:one02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   115126485
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_HPS5 TPR_Sec16 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Prp18 SAP_new25
Other DBs
NCBI-GeneID: 115126485
NCBI-ProteinID: XP_029511968
LinkDB
Position
LG4:complement(29893393..29917974)
AA seq 1590 aa
MKLKEINRTAIQSWSPAQHHPVYLAAGTSAQQLDASFSTSASLEIFELDLAEPSLDMKLR
GAYSSSHRYHKLAWGPHGMDAQGLPSGVLIAGGENGDVILYDPAKIIAGHGDVVIAQSNK
HSGPVRALDVNSFQDNLVASGGNESEIYIWDLNNFGSPMTPGPKTQPLEDISCVAWNRQV
QHILASASPSGRASIWDLRKNDLIIKVSDHSNRMHCSGLEWNPEVATQLVLASEDDRMPV
IQIWDLRFATSPLKVLENHTRGVLAIAWSLADPELLLSCGKDNRILCWNPNTAEVLYELP
TSTQWCFDIQWCPRNPAVLSAAAFDGHISIYSIMGGSSQASSQTQANTISTSFGNMDPFG
MGQTLPPLQLSQAPPASTTITPLKKPPKWIRRPVGASFAFGGKLVSLENIKPNPQQPQQP
TAHVVHISQVITETTFLERSAQLQATLAAGSFVDFCQEKMDSAQNEFEKTVWSFLKVNFE
NDARGKYLELLGYKKEELAAKIAAALEGEPIQPEEPSTALAPTSVPEPEADPGPEPEVVP
FPAPQLNTEPEVLPPMPEAATVEPTPEPPLEPALQPEPGPQPELAPPPSGDLSASDPMPV
LQSEPVLTVDLSAEPQLLAPVALLPESDPTLAPPADLQQAPMFDPTAPFTLQPPTEFNQV
NSLPVSEFDQVDLQAVPGFDPTSTMPSLQSAVQLDLAPPVSTLQPLADPGLPPEDAFDLI
AATNLQPAAEVELSPAPEPETEDPFDLIAATNLQPVAEVELSPAPEAEAEDPFDLIASAN
LQPAAEVELSPAPEPETEDPFDLIASANLQPAAEVELSPAPEPETEDPFDLIAAANLQPV
AEVTGLLEPLAAEVDLTEALGAEPIAQEEMPVNEEIPLEEEAAPPAEASLPGEAPVPEGI
KLRVSQGVDGLITQALLTGDFQGAVELCLHDNRMADSIILAIAGGAELLEKTQRKYFTKT
HSKITKLISAVVMRDWRDMLQTCELQNWKEALAAVMTYAQPEEFSSLCDLLGCRLEAVED
CTLKAQACLCYICAGNVEKLVTCWTRAQDRHCPLSLQDLVEKVVVLRKAVEQNQESDPSA
VGLLLGEKMSQYASLLASQGSLTNAIAYLPQNTEQVAVQQLRDRLSRALGQQAPAAAPVA
QLPSPQPTAAQPRQLFTPAQPSMVSQQPAPAPVPAAATAPQQYYQPVRSASTVTSWSNQT
PTALPSVPPPHLGPATTEPQVQPTPPMYGMPPSGSAAPPASSSAAYPPMYSHQYQPYPPA
SQYNLGTGGPAIYSPLQYSAPPPPSFSSSSPQAPAPGFMPQYTQQPLYPPPSMGQPVSSA
PPFSPPPLSSGASFQHGGPGSPASYMPPLPPTGSSEGYNPDTTCFMEGEGPQNGWNDPPT
LSRVPKKKKVPENYTPPSPIMAPIFSPLGAGDPQQPPYMPPGQAQNQAPYQGMQQQMAPP
PMNPGMLKTRGGSVEGAPGAPTGDTIQPLQSIPAEKITMKPIPDEHLVLKNTFEGLIHKC
LAAATDPQTKRKLDDANKRLVALYDKLREQTLSPAIIGGLHNMVQCIESRSYVESLNIHT
HIVSSSNFSETSAFMPVLKVVLTQANKLGV
NT seq 4773 nt   +upstreamnt  +downstreamnt
atgaagctcaaagagatcaaccgcacggccatccagagctggagcccagcacagcaccac
cctgtgtacctggcagcaggtacgtcagcccagcagctggatgcctccttcagtacctcc
gcctctctggagatctttgagctggacctggccgagccttctctggacatgaagctccgt
ggagcttactcctcctctcacagataccacaagctggcgtggggtccccacggcatggat
gcacagggtctcccgtctggagtgctcatcgcagggggagagaacggcgacgtcatcctt
tacgacccggccaagatcattgctggacacggtgacgttgtcatcgctcagagtaacaaa
cacagcgggccagttagagcccttgatgtcaactccttccaggacaacctggtggcttca
ggaggtaatgaatcagagatctacatctgggacctaaacaactttggctccccgatgaca
ccaggccctaaaactcagcctctagaggacatcagctgtgtggcgtggaacaggcaggtc
caacacatcctggcctcagccagccccagcggccgcgcctccatctgggacctccgcaag
aacgacctaatcatcaaagtcagcgaccacagcaacaggatgcactgctctgggctagaa
tggaaccccgaggtagctactcagctggtgctggcctcggaggatgacaggatgccagtg
atccagatctgggacctgcgttttgccacctcccctctcaaagtcctggagaaccacaca
cggggtgtcctggccatcgcctggagcctggcggaccctgagctgctactgagctgcggg
aaagacaaccgaatcctctgctggaaccccaacactgccgaggtgctgtatgagctgcct
accagtacccagtggtgctttgacatccagtggtgtcccaggaacccggcggtgctgtcg
gccgcagccttcgacggacacatcagcatctactccattatggggggcagcagccaggct
tccagccagacacaggcaaacacgatcagcacgtcatttggcaatatggatccatttggg
atgggtcagaccctgccccccctgcagctttcccaggccccgcccgcctccaccaccatc
acccccctaaaaaagccccccaagtggatccgcaggcccgtgggggcctccttcgctttt
ggtggtaagctggtgtcgttagagaacatcaagcccaacccccaacagcctcagcagccc
acggctcatgtggttcacattagtcaggtgattacggagacgaccttcctggagcgctct
gcccagctgcaggccacactggctgctggcagcttcgttgacttctgccaggagaagatg
gactcggcccagaacgagtttgagaagaccgtctggtccttcctgaaggtgaactttgag
aatgatgctcgtggaaaatacctggagcttttgggatataagaaagaggagctagcagca
aagattgcagcagcattagagggagaacctattcagcccgaggagccctccactgctctt
gcccccacctctgtgcctgaacctgaggctgatcctggaccagaaccagaggtagtgccc
tttcccgctccccagctcaacacggagcctgaggtccttcctcccatgcctgaggctgct
actgttgagcccacccccgaaccaccgcttgagcccgccctccagcctgaacctggaccc
cagccagagcttgcccccccgcccagcggtgacctttcagcttctgatcctatgcctgtc
ctccaatcggagcctgttcttactgttgacctcagtgcagaaccccagcttcttgctccc
gttgctctcctgccagagtctgaccctactctggcccccccagctgacctgcagcaagca
cccatgtttgatcccactgccccctttaccctccagcctccaacagagttcaaccaagtg
aactcactgcctgtatctgaatttgaccaggtggacttacaggctgtacccggcttcgac
ccgacatcaacaatgcccagtctgcagtcggcagtccagctggacctggcgcctcctgtc
tccaccctgcagcctctagcagaccctggactcccgcctgaagacgcatttgacctcatc
gctgctacaaacctccagccagcagcagaagtggaactctcacctgctccagaaccagaa
acggaagatccatttgacctcatcgctgctacaaacctccagccagtagcggaagtggaa
ctctcacctgctccagaagcagaagcggaagatccatttgacctcatcgcttctgcaaac
ctccagccagcagcagaagtggaactctcacctgctccagaaccagaaacggaagatcca
tttgacctcatcgcttctgcaaacctccagccagcagcagaagtggaactctcacctgct
ccagaaccagaaacggaagatccatttgacctcatcgctgctgcaaacctccagccagta
gcggaagtgactggacttctggaaccattggcagcagaagtagacctgacagaagccctt
ggagctgagcccatcgcccaggaagagatgccagtaaatgaagagattcctctggaggag
gaggcggctccaccagcagaggcgagcctgccaggggaggctccagtcccagagggcatt
aaactccgcgtcagtcaaggcgtggatggcctgatcacccaggccctgctgacgggggac
ttccagggcgcagtggaactctgtctccatgacaaccgcatggctgacagcatcatcctg
gccatcgccggaggggctgagcttctagagaaaacacagaggaagtacttcaccaagact
cacagcaagatcaccaagctgatcagtgcggtggtgatgagggactggcgtgacatgctg
cagacctgtgagctgcagaactggaaggaagctctggctgcagtcatgacctacgctcag
cccgaggagttctcctctctgtgtgacctgctgggctgcagactggaggctgtggaggac
tgcacgctgaaggctcaggcttgtctgtgttacatctgcgctggcaacgtggagaaactg
gtgacctgctggaccagagcacaggacagacactgccctctctctctgcaggatctagtc
gagaaggtggtggtgctacgcaaggcggtagagcagaaccaggagtctgatccctctgct
gtggggcttctactgggggagaagatgagtcagtatgccagcctgctggcctcccagggc
agcctcaccaacgccatcgcatacctgccccagaacacagagcaggttgcggtgcagcag
ctgcgtgaccgtctcagcagagctctgggtcaacaggctcctgctgcagccccagtagcc
caactcccatcccctcagcccacagctgcccagcccaggcagctcttcacccctgcccag
ccttctatggtgtcccagcagcccgctccggcccctgtgcctgccgctgccaccgcaccg
caacagtattaccagccggtgaggtctgcctctacagttacctcctggagtaaccaaact
cccacagctctccccagtgtccctcctcctcatctaggccctgccaccacagagccccag
gttcagccgacaccccccatgtatgggatgcctccctctgggtcagctgctcccccagcc
tcctcgtctgctgcatacccccccatgtactcacatcagtaccagccctaccctccggcc
agccagtacaaccttggcactggtggcccagctatctattcacctctccagtactctgct
cctcctcctccctccttctcttcctcctcaccccaagccccagccccaggcttcatgccc
caatacacccaacaacccctctacccacctccttccatgggccagcctgtgtcctccgct
cctcctttctctcctcctccgctgtcatctggagcgtctttccaacatggcggaccgggt
tcgcctgcctcgtacatgccgccactcccaccaaccggatcctcagagggatataatcca
gacactacctgtttcatggaaggtgaaggcccacagaatggctggaacgatccgcctacc
ctgagcagagtgccaaagaagaagaaggttccagagaactacacgcctccttcccccatc
atggcccccatcttttctcccctcggtgctggggacccccagcagcccccctacatgcct
ccaggccaggcccagaaccaggccccctaccagggcatgcagcagcagatggccccccca
cccatgaaccctggtatgctcaagacgcgtggaggaagtgtggagggagcgcccggagcc
ccgactggagataccatacagccgctgcagtccatccctgctgagaagataaccatgaag
cccatccccgatgagcacctggtcctgaaaaacacctttgagggcctcatccacaaatgc
ttggctgctgccaccgatcctcaaaccaagaggaagctggatgacgccaacaaacgcctt
gtggccctctacgacaagctacgagagcagaccctctccccagccatcatagggggcctg
cacaacatggtgcagtgcatcgagtctcgatcctacgtggagagcctcaacatccacaca
cacatagtgagcagcagcaacttcagcgagacgtctgccttcatgcctgtgctcaaagtg
gtgttgacccaagccaacaaactgggggtctga

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