Oncorhynchus nerka (sockeye salmon): 115126548
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Entry
115126548 CDS
T07952
Name
(RefSeq) COP9 signalosome complex subunit 4-like isoform X1
KO
K12178
COP9 signalosome complex subunit 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115126548
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
115126548
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GFIT
Motif
Pfam:
PSMD12-CSN4_N
CSN4_RPN5_eIF3a
PCI
RPN7
DinB
RsbU_N
Motif
Other DBs
NCBI-GeneID:
115126548
NCBI-ProteinID:
XP_029512034
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All DBs
Position
LG4:29957064..29963469
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AA seq
421 aa
AA seq
DB search
MAAGVRQELAQLMNSSGSHKDLAGKYRQILEKAIQFTDAEQLESLKAFVEAMVNENVSLV
ISRQLLTDFCTNIPSLPDSTAKAVYHFTLEKIQPRVISFEEQVASIRQHLATIYEKEEDW
RNAAQVLVGIPLETGQKQYNVDYKLDTYLKIARLYLEDDDPVQAEAYINRASLLQNESTN
EQLQVHYKVCYARVLDYRRKFIEAAQRYNELSYKSIVHETERLEALKHALHCTILASAGQ
QRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGSQLQEFAAMLMPHQKATMADGSSIL
DRAVIEHNLLSASKLYNNITFEELGALLEIPPAKDDCPDGEVPGYRCNLAEKIASQMITE
GRMNGFIDQIDGIVHFETREPLPTWDKHIQSLCFQVNNLLEKITAAAPEWTAQAIEAQMT
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggagtgagacaggagcttgcacagcttatgaattcaagcggatcccacaaa
gatctcgctggaaaatatcgacagattctggagaaggccatccaattcacagatgcagaa
caattggaatcattaaaagcattcgtcgaagcaatggtcaatgagaacgtcagcttagtg
atctctagacagctgctgacagacttctgcacaaacatccccagtcttcctgacagcaca
gccaaggcagtctaccacttcacactagagaagatacagcccagggtcatctcttttgaa
gaacaggtggcctccatcagacagcacttagccaccatctatgagaaggaggaggactgg
agaaacgctgctcaggttctagtgggcattcctctggaaacaggacagaagcagtacaac
gtagactataagttggacacatacctgaagatcgcccgtctgtacctggaggatgacgac
cctgtccaggccgaggcctacatcaacagggcctctctgctccagaacgagtccaccaac
gaacagctacaggtccactacaaagtgtgctacgccagagtgctggactacaggaggaag
tttatcgaggcggcgcagcggtacaacgagctctcctacaagtccatcgtccacgagacc
gagcgtctggaggccctgaagcacgctctccactgcaccatcctggcatcagcgggccag
cagcgctcccgtatgttagccaccctgtttaaagacgagcgctgtcagcagctggcggcc
tacggcatcctagagaagatgtacctggaccggatcatcagggggagccagctgcaggag
tttgcagctatgctcatgccccaccagaaggccaccatggcagacggctccagcatattg
gacagagctgttattgaacacaacctgctgtctgctagcaaactttacaacaacatcacg
tttgaagagctaggagcgcttttggagatccctcccgctaaggacgattgtcccgatggt
gaggtccctggttacagatgcaatctggctgagaagatcgcctcccagatgatcactgag
ggacgcatgaacggcttcatcgaccagatcgatggaatcgtccactttgagacacgggag
cccctgcccacctgggacaagcatatccagtctctgtgtttccaggtgaacaacctgctg
gagaagatcactgcggctgctcctgagtggacagcccaggccatagaggctcagatgacc
cagtag
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