Oncorhynchus nerka (sockeye salmon): 115126585
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Entry
115126585 CDS
T07952
Symbol
cwc27
Name
(RefSeq) spliceosome-associated protein CWC27 homolog
KO
K12737
peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:
5.2.1.8
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115126585 (cwc27)
03110 Chaperones and folding catalysts [BR:
one03110
]
115126585 (cwc27)
Enzymes [BR:
one01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
115126585 (cwc27)
Spliceosome [BR:
one03041
]
Complex C
Other components
PPlases
115126585 (cwc27)
Chaperones and folding catalysts [BR:
one03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
115126585 (cwc27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
115126585
NCBI-ProteinID:
XP_029512079
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All DBs
Position
LG4:complement(30084582..30137988)
Genome browser
AA seq
484 aa
AA seq
DB search
MSNIYIQEPPTNGKVLIKTSAGDIDIELWSKEAPKAARNFVQLCMEGYYDGTPFHRVVPE
FIVQGGDPTGSGTGGESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRA
DELNNKHTIFGKVTGDTVYNMLRLSEVECDQEERPLNPHKIRTTEVLHSPFDDIIPRERK
KSKKDEDKKEGKKSQSKATKNFSLLSFGEEAEEEEEMVTQVSQTLKGKSKSSHDLLKDDP
LLSSVPAVNKKKARGGAGEAAEGEDDEAAEGDANGDEEEYDSDERQEMRERISKKLKKMK
EDEKKSTDPSEEDRGKRANRSDELRQEARQLKKDLLAIKKRREDIANPPKKEEEGEEEKK
PGSEAVAEYLEGKKKYEDMRKQKLKKGSSREAQTMALLDRFKSKLSSAITETSEAPEEAP
EELAEDDDKGWMAHVLQFDEQTRKVKDANMQDEDTFEISDPRNPVNKRRREESKKIMKEK
KAKR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacatttacattcaagagcctccaacaaacggaaaggttctgatcaagacctca
gctggtgacatcgatattgagctgtggtccaaagaggcacccaaggccgccagaaacttt
gtccagttatgcatggaaggctactatgatggaacaccattccatagagtggtgccagag
ttcattgtccaaggaggagatcccacaggatccgggacggggggagagtccatctatgga
cgcccattcaaggatgagttccactccagactgcgtttcaacagacgtggtctggttgcc
atggccaacgcagggccccatgacaacggcagccagttcttcttcaccctgggtcgggca
gatgagctcaacaacaaacacaccatctttggaaaggtgacgggtgatacagtgtacaac
atgctcaggttatccgaagtggaatgtgatcaggaggaaagacctttaaatccacacaag
atacgaaccactgaggtgttacattctccctttgatgacatcattccacgtgaaagaaaa
aaatccaaaaaggatgaagacaaaaaagagggaaagaaatctcagtccaaagcaacaaag
aacttcagtctgttgtcatttggagaggaagctgaggaggaagaggaaatggtaactcaa
gtcagccagacactgaaggggaaaagcaaaagcagtcatgacctgctgaaggatgatccg
ctgctgagctctgtcccagcggtcaacaagaaaaaagccagaggtggggctggagaagca
gcagagggtgaggatgatgaggctgcggagggggatgcgaatggtgacgaagaggagtat
gactctgacgagaggcaggaaatgagggagaggatctctaagaagctgaagaagatgaag
gaggatgagaagaagagtaccgatcccagcgaggaggacagaggaaagagggccaaccgc
agcgacgagctgcgtcaagaggctcgccagttgaagaaggacctactggccatcaaaaag
aggagggaagacatcgccaatcctccaaagaaggaggaggaaggcgaggaagagaagaag
ccaggcagcgaggcggtggcggagtacctggagggcaagaagaaatatgaagacatgagg
aaacagaaactgaagaagggatccagcagagaagcgcagacaatggcgctgctggaccga
ttcaagtccaagctgtcttcagccatcactgagacctccgaggcccctgaggaggcccct
gaggagctggcagaggacgacgacaaaggatggatggcccatgttctccagtttgacgag
caaaccaggaaagtcaaggatgccaacatgcaggacgaagacacgtttgagatctccgat
ccacgaaaccccgtcaacaaacggcggagagaggagagcaagaagatcatgaaggagaag
aaggccaagaggtga
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