Oncorhynchus nerka (sockeye salmon): 115126949
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Entry
115126949 CDS
T07952
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115126949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115126949
Spliceosome [BR:
one03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115126949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
115126949
NCBI-ProteinID:
XP_029512446
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MANNTVAGNQQQGQAVNKIGPNPGKHGNNLPLWGNEKTMNLNPMVLTNVLSSPYFKVQLY
ELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFT
LKMTRKQVMGLITHNDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCV
MTIGEMVRSFLTKLEWFSTLFPRIPVPVQKMIDTQMKARPRKVPEKVEEPVEPVPEEGRA
TEGRRRSRSPRRSPKRSRSRSHHRERERHGPSFDRELDRERDRQRKEREGKDGDRRGGDR
ERGEKARDRGGERERRRSRSRERKGERKDREKEREGGGENDRSRRKDRGSDRGRERSKDK
RSKGETEDRRHKEERDERRGHREERKAKRSSRSGSRERRHKEKSKKRGEVQEESGSKSRA
EVGEKEKSRKRERSHERGEGEQRSHKRSRSKERSHRPREPSNGKAHGKHRERRRSQSMDR
GERTTQRAQEEPEHG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacactgtagccgggaatcagcaacaaggacaggctgtgaacaagattggc
cctaaccctggaaaacatggcaacaacttgcctctctggggaaacgaaaagactatgaac
ttgaaccctatggtcctcaccaacgtgctctcatctccatatttcaaggttcagctctat
gaactgaaaacctaccatgaggtggtggatgaaatatatttcaaggtgactcatgttgag
ccctgggagaaaggcagcaggaagactgctggacagactggaatgtgcggaggggtgcgt
ggagtcgggacaggcggcattgtgtccacggccttctgcctgttgtataagctgtttacc
ctcaagatgacccgcaagcaggtgatgggactgatcactcacaacgactcgccctacatc
agagcacttggtttcatgtacataagatacacccagccccctgcagacctggtggactgg
tatgatggtttcctggatgatgaggaggagctggatgtgaaggccggaggcggctgcgtt
atgaccatcggtgagatggtccggtcgtttctcaccaagctggagtggttctccacactc
ttcccacgcatcccggttcctgtgcagaagatgattgacacacagatgaaggcaaggccc
cggaaggttcctgagaaggtggaggagccggttgaacctgtgccagaggagggacgggcg
acagaagggcgtagacgctcccggagccccaggaggtcccccaaacggtcgaggagcagg
agccaccaccgcgaacgagagcgccacggcccaagcttcgaccgcgagctggacagggaa
cgtgaccgccagaggaaggagagggagggtaaggacggggacaggagaggaggggacagg
gagagaggggagaaagcgagggacaggggaggagaaagggagaggcgacggtccaggagc
agggaacgcaagggagagcggaaagacagggagaaagaaagggaggggggcggggagaac
gacagaagcaggaggaaagacaggggcagtgacagagggagggagaggtccaaggacaag
aggagcaagggagagactgaggacaggagacacaaagaagagcgggatgagaggaggggg
cacagggaggagaggaaggccaagcgctccagtcggagcggaagcagggaaaggagacac
aaggagaagtccaagaagagaggagaagtccaagaagagagtggaagcaagagcagggcc
gaggtgggggagaaggagaagagcaggaagagagagcgcagccatgagaggggggagggc
gagcagcgctcacacaaacgcagccgcagcaaagagcggagccaccggccacgagagccc
agcaacgggaaagcccacgggaaacaccgagagcgcaggaggagccagagcatggataga
ggagagaggacgacacagagagcgcaggaggagccagagcatggatag
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