Oncorhynchus nerka (sockeye salmon): 115127070
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Entry
115127070 CDS
T07952
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one01100
Metabolic pathways
Module
one_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115127070
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115127070
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
115127070
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
115127070
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115127070
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Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FAM184
L_thumb_ring_vir
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
115127070
NCBI-ProteinID:
XP_029512568
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Position
LG4:32249183..32295528
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AA seq
564 aa
AA seq
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MLRRGLLAWVSRVGVLLVLVCCSLSLLYVMTCSPHSEDNLVSHALPRPGLGVGAAGGIGA
GQSGPPGREDYQAMLAEREEQHKLHMASLKKQIAQLKEALQERSEQLKGVQDTMERAAGR
GQGGQSPGGGALGEGGQGPGADRSHTDLQEFLRSQLGRAEVHQGTRLPNEYAVVPFESFT
LQRVYQLEMGLTRHPEEKPVRKDRRDELSEALETALRSLNTPRDGTDKGRTTKVYSPSDF
IEGIARTEKDKGTLYELTFKGDQSREFRKLVLFRPFGPLMKVKNERVDTANVPINIIVPL
SQRADKFRHFMHNFREVCVRQDGRVHLTVVYFGKDQMNEVRSTLENTSREINFKNFSLLQ
LNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRLNAQPGKKVFYPVLFSQ
YNPTLIYGNHDHIPPVEQQLVIKKDTGLWRDFGFGMTCQYRSDFINIGGFDVDIKGWGGE
DVHLYRKYLHSNLLVVRSPSRGLFHLWHEKRCADELPPEQYRMCMQSKAMNEASHGQLGM
LFFRHEIEAHLRKQKPQRSIAKKT
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaggggtctgctggcctgggtgtcccgtgtgggcgtgctattggtcctagtg
tgctgctctctgtccctcctctacgtcatgacctgcagcccccactccgaggacaacctg
gtgagccacgccctgccacgccccgggctgggggtaggggcagcagggggcataggggcg
ggtcagagcggacccccggggcgggaggactaccaggccatgctagcggagcgcgaggag
cagcacaagctacacatggcgagtctgaagaagcagatcgcccagttaaaagaagcactg
caggagcgtagtgagcagctcaaaggagttcaagacacaatggaacgggcggctgggaga
ggccagggcggacagtccccaggaggaggtgccctcggggaggggggccaggggcctggg
gctgacaggagccacacggacctccaggagttcctccgcagtcagctgggccgggcggag
gtccaccaggggaccagactacccaatgagtacgccgtggtgccctttgagagcttcacc
ctgcagagggtgtaccagctggagatgggcctgaccaggcaccctgaggagaagcccgtg
aggaaggaccggagggatgagctgagtgaagcgctggagacagccctgcggagcctcaac
acaccccgagacggaacagacaagggccggaccaccaaggtctactccccatcagacttc
atagaaggtatcgctcggacggagaaggacaaaggcactctgtatgagctcaccttcaaa
ggggaccagagccgtgagttcaggaagctggttctgttccgtccctttgggcccctgatg
aaggtgaagaacgagagggtggacacggctaacgtccccatcaacatcatagtgcccctc
tcccagagggccgacaagttcagacacttcatgcacaacttcagagaggtgtgtgtgcgg
caggatgggcgtgtccacctcacagtggtatattttgggaaggaccagatgaatgaagtc
cggagcaccctggagaacacgtctagggagatcaactttaagaacttctccctgctccag
ctgaatgaggagttctccaggggacgtggcctggatgtgggcgccagggcgtggaaggga
ggaaacgtcctcctcttcttctgtgacgtcgacatctactttaccgccgacttcctgaac
acctgccgtctcaatgctcaacctggtaagaaggtcttctatcctgttctgttcagccag
tataacccaaccctgatctacggtaatcatgaccacatcccgccagttgaacagcagctg
gtgattaaaaaggacacaggattatggagagactttggcttcggaatgacgtgccagtac
agatcagatttcatcaacataggtggttttgacgtggacatcaaaggttggggtggtgag
gatgttcacctttacaggaagtacctgcacagcaacctgctggtggtccggtccccatcg
cggggcctcttccacctgtggcacgagaagcgctgtgctgacgagctgcccccggagcag
tacaggatgtgcatgcagtccaaggccatgaacgaagcctcacacggccagctgggcatg
ctcttcttccgacacgagatcgaggcacacttgcgtaagcagaaaccccagcggtccatt
gccaaaaagacatga
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