Oncorhynchus nerka (sockeye salmon): 115127402
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Entry
115127402 CDS
T07952
Name
(RefSeq) rab GTPase-activating protein 1-like isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115127402
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115127402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Ig_mannosidase
Motif
Other DBs
NCBI-GeneID:
115127402
NCBI-ProteinID:
XP_029512881
LinkDB
All DBs
Position
LG4:33054882..33166466
Genome browser
AA seq
1093 aa
AA seq
DB search
MEDKASVGKISVSSDSVFTLNSEDFVLVSRLGDDTPGSSTNNGSDDEKTGLKVISEEGVS
FKIVGNGSEQQLQKELEDVLMDPSVAEQALGGGVPSGGGVDQAGGVDHVLSPAMAAPPEP
QPCPDLLGTPPKVEMVLPVQSAAQESELNERSYRGDESSSECSPSTPIPDEDSVVFNKLT
YLGCASVNAPRSEVEALRMMTILRGQCQLPLDVTLSVPGVSEGTVRLLDPQTSTEIASYP
IYKILFCVRGHDSTPESDCFAFTESHYNAEIFRIHVFRCEIQEAVSRILYSFAMAFRRST
KKTLLSGLAPPLTPDSDVFTFTVSLEIKEDDGKGTFSAVAKDKDKNSFKLRPGMDKKIVI
YVQQTSNKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQ
FQAVNEETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNERLFWPFSKRNYTET
YYLKLRQMERKSNNDTLYEVLSLESESERERKKTTASPNILQSSSHGSMVPSPPEDDEEE
DNDEPLLSGSGDVSKECAEKILETWGDLLSKWHLNLSVRPKQLPALVRSGVPEALRGEVW
QLLAGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICK
AYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFF
QLERLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVI
FNVALALLKTSREDLLATDFEGALKFFRVPVPKRYRSEENAKKLMELACSMKISQKKLKK
YEKEYHAMREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDN
AEEKADALNKELLMTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGE
YKQICSQLSERLEKQQAANKGELEKIRMKVEGCEKCSILFSKEGRLKAARKLKEGSEEET
DEEKEALKNQLREMELELAQTKLQLVEAECKIQDLEHTLGLALNEVQAAKKTWFNRTLTS
IKTATGAQGKETT
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaggcctcggtggggaaaattagcgtgtcgtccgactccgtgttcaccctg
aacagtgaggactttgtgctggtgtcgcggctgggggacgacaccccaggctcctccact
aataacggtagcgatgacgaaaagaccggactgaaggtgatttctgaggaaggggtcagc
tttaagattgtggggaacggcagtgagcagcagttgcagaaggagctggaggatgttctg
atggacccctctgtagctgagcaggcgctgggtggtggcgtccccagtggtggcggtgtg
gaccaggcaggcggggtagaccatgttttgtcccccgccatggcagcaccacccgagccc
caaccgtgccctgacctcctcggcaccccgcccaaagttgagatggtgctacccgtccaa
tctgcagcgcaggagagtgagctgaatgaacgatcttaccgcggggatgagtcgtcatcg
gagtgcagccccagtacgcccattccagacgaggacagtgtggtctttaataagctgacc
tacctgggctgtgcctcggtcaacgctccccgcagtgaggtggaagcgctccgtatgatg
accatactaagagggcagtgccagctacccctggacgtcaccctgtctgtgcctggagtc
tcagagggcaccgtcaggttgctggacccccagacaagcacagagatagccagctacccc
atctacaagatcctgttctgtgtgcggggtcacgacagcacgccagagagtgactgcttt
gccttcacggaaagtcattacaacgcagagatcttccgcatccatgtcttccgttgtgag
atccaagaggcggtcagcaggatactgtacagcttcgccatggcctttaggcggtccacc
aagaagacgctcctctcgggcttggctccacccctgactccagacagcgacgtcttcacc
ttcaccgtcagcctggagatcaaggaggatgatggcaaagggacctttagtgctgtggcg
aaagacaaagacaagaacagcttcaagctgcgtccgggaatggacaagaagatcgtcatc
tacgttcaacagacgtctaataaggagctggccatagagaggtgcttcggcctcctgctg
agtccaggaaagaacgtgaagaacagtgacatgcacctgcttgacctggagtcgatgggg
aagtcctctgatgggaagtcctacatcatcacagggagctggaatcccaacacacctcag
ttccaggccgttaacgaggagacacccaaagataagttcatgtacatgacgacggcggtg
gacctggtgatcaccgaggtggaggagccggttcgtttccttctggagaccagggtcaga
gtctgctctcccaacgagaggctattctggcccttcagcaaacgcaactacaccgagacc
tactacctgaaactccgacagatggagcgtaagagtaacaacgataccctgtacgaggtg
ctgagcctggagagtgagtcagagagggagaggaagaaaaccacagccagccccaacatc
ctgcagtcttcctcccacggctccatggtgccatcgcctcccgaggatgatgaggaggaa
gacaatgacgagccgttgctgagtggctcgggagacgtgtcaaaggagtgtgctgagaag
atcctggagacctggggagacctgctgtccaaatggcacctgaacttgtcggtgcgtccc
aagcagctcccggcgttggtacgtagtggcgtaccagaggccctcaggggagaggtatgg
cagctcctggccggttgccataacaatgaccaccaggtagaggagtaccgcaccctcatc
accaaggagtctccccaggacagtgccatcaccagagacatcaacaggactttcccagct
cacgactatttcaaggacactggaggagacggccaagactcactctacaagatctgcaag
gcctactcagtgtatgatgaggagattggctactgccaggggcagtctttcctggctgcg
gtgctgctgctgcacatgcctgaggagcaggcctttagtgtcctggtcaagatcatgttt
gactatggactcagggagctcttcaagcagaattttgaggatctacactgcaagttcttc
cagctggagcgactcatgcaggagtacatcccagacttgtataaccacttcctgaacgtg
ggtctggaggctcatatgtacgcctctcagtggttcctcacgctcttcacagccaagttc
cccctctacatggtgttccacatcatagacctgcttctctgtgagggcatcagtgtgatc
ttcaatgtggctctggctctcctgaagacctcgcgagaagacctgctggcgactgacttt
gagggggcgctcaagttcttccgagtcccagttcccaaacgctaccgctcagaggagaac
gctaagaaacttatggaactggcctgcagcatgaagatcagtcagaagaagctgaagaag
tacgagaaggagtaccacgccatgagagagcagcaggaacagcaggaagctcccattgag
agatacgagagggagaaccgtcgtctccaggaggctaacatgcgtctggagcaggagaat
gatgacctggcccatgaactggtcagcagcaagatcgccctgcgcaaggacctggacaac
gctgaggagaaagcagacgctctgaacaaggagctgttgatgaccaaacagaagctggtg
gattcggaggacgagaagaggcgtttagaggaggagtctgcgcagctgaaagagatgtgt
agacgggagctggacaaatcagagtctgagataaagaagaatggttccatcataggagag
tacaaacagatctgctcccagctcagtgagcgtctggagaaacagcaggcagccaacaag
ggagagctggagaagattcggatgaaagtcgaaggctgtgaaaagtgctccatcctgttc
agcaaggagggtcgtctgaaggcagcgaggaagctgaaggagggcagtgaggaggagacg
gacgaggagaaggaggctctgaagaaccagctcagagagatggagctggaactggcccag
accaaactacagctggtggaggcagagtgcaagatacaggacttggagcacaccctgggt
ctggctctcaacgaggtccaggctgctaagaagacctggttcaacagaaccttaacctcc
atcaagactgcgacgggagcacagggcaaggagacaacctaa
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