Oncorhynchus nerka (sockeye salmon): 115127516
Help
Entry
115127516 CDS
T07952
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one00514
Other types of O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115127516
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115127516
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115127516
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
115127516
Glycosyltransferases [BR:
one01003
]
O-Glycan biosynthesis
O-linked Gal type
115127516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
115127516
NCBI-ProteinID:
XP_029512995
LinkDB
All DBs
Position
LG4:33508547..33520183
Genome browser
AA seq
591 aa
AA seq
DB search
MFLWVLVLVAFVSRTECYFSEEKYQEESKIQPPTIIIAIIARNAAHSLPYYLGALERQNY
PKTRISVWAATDHNADNTTAVLKEWLTVMQKFYHYVEWRPMEHPTSYPGEMGPKYWSNGR
YEYLMKLKQAALNFAKQRWADYILYADTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRHRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHQDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNVPAKPHHTIEDDSINFSHLILDAMIDG
PSMAPSKYVSLFPKRRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVLRLMEEVEMVELDWDIIYLGRKQVTPGDKEEVVENVRNLVVADYSYWTLSY
AISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHINEDYKSHFANRNLQAFSTRPLLVQPA
HYAGDPEWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQSDMLQATYKDEL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgggttttagttttagtggccttcgtttctagaacagaatgttatttttcg
gaggaaaaatatcaagaagagtcgaaaattcagccgccaacgattattattgcgatcatt
gctcggaacgcggcgcactctttgccatactacctcggggcgttggagaggcagaactat
cccaaaacccgcatctctgtatgggcagcaacagatcacaacgctgacaacactacagct
gttctgaaagaatggttgaccgtcatgcagaagttctatcactatgtggagtggaggccc
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaacggcaga
tatgaatacctgatgaaactcaaacaggctgctctcaacttcgccaagcaacgctgggct
gactacatactgtatgcagacacggacaacatcttgaccaacccagagaccctcaacctc
ctgatagcagagaacaagtctgtggtcgcccccatgttggactcccagggagcttactct
aactactggtgcggcatcactccacagggttactaccggcgtacggctgagtatttcccc
accagacaccgccatcggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacgggcatgaagaagctggccttccaccctcctcaccaggactac
tcctggcccttcgatgacatcatcgtcttcgccttctcttgtcgcgtctcagaggtgcag
atgtacctgtgcaacaaggtgaggtatggatacctgaacgtcccagccaagcctcaccac
accatagaggacgacagcatcaacttcagccacctcatcctggacgccatgattgacgga
ccctccatggccccctccaaatatgtcagcctcttccccaaacggagagacctcatgggc
tttgatgaggtgtacctgatcaacctgcgtcggcgtcaggaccgtagggacaggatgctg
tactctctcaacgagctggagatcgacgtcaaagtggtggacgccatagacggaggagcg
ctgaacagcagtgatataaagatccttggagtggacatactacctggttactatgacccg
ttctctcgccgtaccctgaccaaaggagaggtgggatgcttcctcagccactattacatc
tggaaggagatggtagaccagcagatggataaggctctgatcttcgaggacgacgtgcgt
ttccaggccaacttcaagaggcgcgtgctccgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgacgccgggtgacaaggaggag
gtggtggagaacgtgaggaacctggtggtagcagactattcctactggaccctgtcctac
gccatctctctccagggggcccagaagctgctcaacgccgaacccctctccaagatgctg
cccgtcgacgagttcctgcccatcatgtacgataaacacatcaatgaggactacaagtct
cacttcgcaaaccgtaacctgcaggcgttctctacgcgccccctactggtacaaccagcc
cactacgctggggaccccgagtgggtgagcgacacggagacctccacgctgtgggacgac
gacaacgtgcgaacagactggaggggttcccacaaaaccctgaagggggcacctcaatcc
gacatgctgcaggcgacgtataaggatgagctctag
DBGET
integrated database retrieval system
