Oncorhynchus nerka (sockeye salmon): 115127538
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Entry
115127538 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RLIM-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115127538
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115127538
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115127538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Trypan_PARP
Gp5_trimer_C
MecA_N
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
115127538
NCBI-ProteinID:
XP_029513010
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MEGSDSSEPGASDQPEVQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELLSRLQQIKDGPEQQQPSINTSETGEATGGKAPLYFSLCLSTLAECPEDRSTAGTPF
GWPAWNTVGGDRQHHPPWSPSGTVMAGSGRTNPNSGRLRFTPRTPPRHPPNTHPTPTQHP
PNNPPRPPPPPHLGAPAHTPRRGRRGSSAAAEVAHGGQRGEVLEEPVVEEMAVIVEPEAE
MEPEAEVEAEPVADVEAEPEADVEAEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAE
VEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEVEAEPE
AEVEADPEAELEAEMVPELVVEVVPQPPSPVTTTPPVSRPVSPLVQAPPAAPAPPSPPPE
EPPRRGQRRARSRSPEQRRTRARTTRSRSPLTLDRLPRHVPTSHSPPTLSPQAPAEGSSR
TRQHVLSRQSTAEYEAQSAGTGFDTGSGNAPEPGTTPPQEGEAAGGEGAAGRRPPTIMLD
LQVRRVRPGEYRQRDSIANRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTI
RIPIRRISDAGLGEATSMALQTMIRQIMTGFGELSYFMDSDSDSSDSNRGGGNPTGAADL
AEALNTPDGGVAGMAEGAEPPVSVGGPSVGGAGEARTEEREGEDGMGLGLSPGIGLGVGA
TPREGRARPRAPISLEEPGSLPFLRLAHFFLLNDEDEEQPRGLTKEQIDXLSTRNFGESD
ALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttctgagccgggcgccagtgaccaaccagaggtccagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccaggtgagatcaca
gcagaggagttgttgagtcggctgcagcagattaaggatggaccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggaggtaaggctcctctgtacttttca
ttatgtctttcaacactggccgaatgtccagaggaccgttcaacggcggggacccccttt
ggatggcctgcctggaacaccgtcggcggggacaggcaacaccacccgccgtggtcaccg
agcggcaccgtcatggcgggcagtggccggaccaacccaaacagcggcagacttcggttc
acaccccgcacccccccccgccacccacccaacacccacccaacacccacccaacaccca
cccaacaaccccccgcgccccccccccccaccacacctaggagcacctgcccacaccccc
cgccggggtcggagagggtcctcagctgcggcggaggttgcccatggaggacagagagga
gaggtgctggaggaaccagttgtggaggagatggctgtcatagtggaaccagaagcggag
atggagccagaggctgaagtagaagctgagccagtggctgacgtagaagctgagccagag
gctgacgtagaagcagaggctgaagtagaagctgagccagaggctgaagtagaagctgag
ccagaggcagaagtagaagctgagccagaggcagaagtagaagctgagccagaggcagaa
gtagaagctgagccagaggctgaagtagaagctgagccagaggcagaagtagaagctgag
ccagaggcagaagtagaagctgagccagaggcagaagtagaagctgagccagaggctgaa
gtagaagctgagccagaggctgaagtagaagctgagccagaagtagaggctgagccagag
gctgaagtagaagctgatccagaggcagaactagaagcagagatggtcccagagttagta
gtagaggtagtcccacagccgcccagccctgtcaccaccacccctcctgtctccagacca
gtcagtcctctggtgcaggcccctccagccgcccctgcccctcctagcccgccccctgag
gagcctccgcgacggggccagagacgagcccgcagccgtagccctgagcagcgccggacc
agggctcgcaccacacgaagtcgttcccccctcaccctggaccgactcccccgccacgtc
cccacctcacacagcccccccaccctgtccccccaggcccccgcagagggaagctcacgg
actcgacagcatgttctgtcccggcaaagcaccgcagagtacgaggcccagtcagccgga
acagggtttgacacagggtctgggaacgccccagagcccggtaccaccccaccccaggag
ggagaggccgcgggcggggagggagcagcaggacgacgtcctcccaccatcatgctggac
ctgcaggtgcgtcgtgttcgtccaggtgagtaccgccagagggacagcattgctaacaga
acccgctcacgctcccagaactccaacaacaccttcctgtacgagagtgagagggggggg
ttccgcaggaccttctcccggtccgaacgtgctggtgtgaggacgtacgtcagcaccatc
aggatccccatcaggaggatcagtgatgcggggttgggagaggccacctccatggctctg
cagaccatgatacgacagatcatgaccggcttcggagagctcagctacttcatggactcg
gactctgactcctcggactcaaaccgtggcggtggtaaccccactggcgctgccgacctg
gccgaggcgctcaacactcccgacgggggagtagccggcatggcggagggggcggagcct
cctgtctcagtgggtgggcctagtgtgggaggagccggggaggcaaggacagaggagagg
gagggggaggacgggatgggtctaggtctgtccccgggaataggtttaggggtgggggcc
acccccagggaggggcgagctcggccccgtgcccccatcagtctggaggaaccggggtcg
ctacccttcctccgccttgctcacttcttcctcctgaatgatgaggatgaggaacagccc
agaggactcaccaaggagcagatcgacnacctctccaccaggaactttggggagagtgat
gctctgaagacctgcagtgtgtgtatcacagagtatgctgaggggaacaagttgaggaag
ttgccctgttctcatgagtaccatgttcactgtatcgaccgctggctgtctgagaactcc
acctgtcctatctgccgcagggccgtgttggtgtctgctaaccgggagagtgtggtctaa
DBGET
integrated database retrieval system
