Oncorhynchus nerka (sockeye salmon): 115127551
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Entry
115127551 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase 5-like
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00600
Sphingolipid metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115127551
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
115127551
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_PGAP2IP
Motif
Other DBs
NCBI-GeneID:
115127551
NCBI-ProteinID:
XP_029513025
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSLRESPFPNSFVEGLHAVSWGLILPCFWFLDRLIAVCMSTSLERTQRHEQECYLHPLKV
FFGFILFLALFLVTAPLAFLGFLLWAPLQAARRPFSYHHEPPSRPAPAEEGERNLGFEAG
ANKATFGFATANLCLLPDGIARFNNLGHTQRRAIAIGRSIVQGVNRPHIRIFVDSPSSCG
TLSPSSSLLPGPSTTSPASYGATDPACQPPPQAHSDEDQADGAVPTTTPPKPSDSNYVVY
VPCDDTEESSHSPAPVINTNHNSNQQDRKGHRNPPRALRTQGVAQRGQAGPDDVPWEVSS
LFPANVDILCLEEVFDKRAAVKLTNTLGPLFNHILYDVGVYACQPPGSCSSFKFFNSGLF
LASRYPVLEAQYHCFPNARGEDALAAKGLLSAKVLVGQNQKEKKLVGYFNCTHLHAPEGE
GEIRCEQLNMLTKWIQEFQVTNSKPDEVVVFDVLSGDFNFDNCSPDDSLEQKHSLFEEYR
DPCRAGPGQEKPWVIGTLLEQPTLYHEDVRTPENLQRTLEREELRKQYISSPVALEGCPM
VYPELGQPWVGRRIDYILYRESSISKHCRTVSVSILFPSLVR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcgggagtccccattccccaacagctttgtggagggcctgcatgcagtgagc
tggggtcttatcctgccctgcttctggttcctggaccgcctcattgccgtctgcatgtcc
accagcctggaacgcacccagcggcacgagcaggagtgttacctccaccctctcaaggtg
ttcttcggcttcatcctcttcctcgccctcttcctggtcacggctcccctggccttcctg
gggttcctgctttgggctcccctccaggccgcccgaaggcctttctcctaccaccacgag
cccccgtcgaggccagcaccagctgaggagggggagaggaacctgggctttgaggcaggg
gccaacaaggccacttttggttttgctactgccaacctgtgcctattgccggacggaatt
gcgcgcttcaacaacctggggcacacgcagcgccgtgccatcgccatcggccggagcatc
gtgcagggcgtgaaccggccacacatccgcatcttcgtggactctcccagtagctgtggc
accctcagcccctccagtagcctgctccccggcccctccaccaccagccctgcctcatac
ggcgctacagacccagcctgccagccaccaccccaggcccattcagacgaggaccaagct
gacggagcggtcccaacaacgacgccccccaaacccagtgactcaaactatgtggtgtat
gtgccctgtgacgacactgaggagtcttcccactctcccgcccccgtcatcaacaccaac
cacaactccaaccagcaggaccggaagggccacaggaaccctccgcgggccctacgcact
cagggggtcgcccagcgcggtcaggctggaccagacgacgtgccctgggaggtgtcttct
ctcttcccggccaacgtggacatcctgtgtctggaggaggtgtttgataagagggcagct
gtgaagctgaccaacaccctggggcccctgttcaaccacatactgtatgatgtaggggtg
tacgcctgccagcctcccggcagctgctcctcctttaagttcttcaacagcggcctgttc
ctggccagccgttacccagtgctggaggcccagtaccactgcttccctaacgcccggggg
gaggacgccctggctgctaaaggcctgctctctgccaaggtgctagttggccagaatcag
aaagagaagaagctggttggatattttaactgcacacacctccatgcacctgaaggtgaa
ggggagattcgctgtgagcagctcaacatgctcaccaagtggatccaggagttccaggtg
accaatagcaagcctgatgaggtggtcgtgtttgacgtgctttctggggatttcaacttc
gacaactgctcacctgatgacagtctagaacagaagcacagtctgtttgaggagtacaga
gacccctgcagggccgggccgggccaggagaagccctgggtcattggcactttgctggaa
cagcctactctgtatcatgaggatgtaaggaccccagagaatcttcaaaggaccctggag
agagaggagctgaggaagcagtacatctcctctcctgtggccctggaaggctgtcccatg
gtctaccctgagttgggtcagccttgggtggggcggcgcatcgactacatcctctacaga
gagagctccatctccaagcactgccgaactgtaagtgtttccatacttttcccctctctg
gttcgctag
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