Oncorhynchus nerka (sockeye salmon): 115127601
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Entry
115127601 CDS
T07952
Symbol
irx1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115127601 (irx1)
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115127601 (irx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
SSTK-IP
MRP-S32
Motif
Other DBs
NCBI-GeneID:
115127601
NCBI-ProteinID:
XP_029513071
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGGDRPGVLTPSSRGGSSELAGNQSAAAAAVTSVLGMYANPY
TAHNYSAFLPYSSADLALFSQMGSQYELKDSPGVHPGSFAAHTSPAFYPYGQFQYGDPAR
PKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGARSKEDEDGNIFGSDNEGDAEKNDDEEEIDLESIDIDKIDDNDGDQSNEEDDDKPE
GRARNRELDSLEKRRAFALQHEAFDKSKNSISSGKELSDSNSNTRVVSPDRQGSFQLPVN
NKPKIWSLAETATSPDSSVKSTSPSGPTGHTPPQMQHPAFLPSHGLYTCQIGKFHNWTNG
AFLGQNSLLNVRSFLGVNQHHHHNLHLQTQLQQQQASVLVSPGASPQLSPKHIDRENVVR
SVSPPTQSLKSSFRPLHDGPRTQQEAPQLVLTALSSA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagttgggctaccctcagtacttaagtgcctcccaagcggtgtacggc
ggggatcgcccgggggtcctgactccgtcgtcccggggagggagctctgagttagcggga
aaccagtcggctgctgcggctgcagtcacctcggtgttgggcatgtacgcaaacccctac
actgcacacaactacagcgcattcctgccttacagcagcgcagacctggctctgttctct
caaatgggctcccagtacgagctgaaggacagtcctggcgtccaccccggcagcttcgcg
gcccacacctcgccagctttctacccttacggtcagttccagtacggggacccggccagg
cccaagaacgcgacccgggagagtaccagcacgctgaaggcctggctcaatgagcacagg
aagaacccctaccccaccaagggagagaagatcatgttggccatcattactaagatgacc
ctgacgcaggtgtccacctggttcgctaacgccaggaggaggttgaagaaggagaacaag
gtgacgtggggagccaggagtaaagaggacgaggatggaaacatcttcggctccgacaac
gagggagacgcggagaagaacgatgacgaggaggagatcgatctagagagcatcgatata
gacaagatagacgacaacgatggagatcagagcaatgaggaggacgatgataaaccggag
ggcagagcgcgaaaccgagaactggacagtctggagaaacggcgggccttcgctctgcag
cacgaggccttcgacaaatctaagaactcaatttcctccgggaaggaactttctgatagc
aacagcaacaccagagttgtgtccccggacagacagggaagttttcagctcccagtgaac
aataagcctaaaatctggtcgttagctgagacggctaccagtcctgatagttctgtcaag
tccacctctccctccggccctaccggtcacaccccgcctcagatgcaacacccagccttc
ctgccctctcacggactatacacctgccagataggcaagttccataactggaccaacgga
gctttcctggggcagaactctctgctcaatgtccggtcgtttctaggagttaatcagcac
catcatcataacctccacttacagacccaactgcagcagcagcaggcctcggtgttggtg
tcgcccggagcctcgccacaactcagccccaagcacatagaccgtgaaaacgttgtaaga
agtgtctctcctccaacgcaatctctgaagtcctcattcagaccccttcatgatggcccc
aggactcagcaagaagccccgcagctggttctaacggccctctcctcggcttga
DBGET
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