Oncorhynchus nerka (sockeye salmon): 115127845
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Entry
115127845 CDS
T07952
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115127845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115127845
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
115127845
REST complex
115127845
Heterochromatin formation proteins
Other heterochromatin formation proteins
115127845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
115127845
NCBI-ProteinID:
XP_029513319
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
FWNVICRKFPELFSWFKNFLGYRESSHIESFPKERTTEGMAMEIDYASCKRLGSSYRALP
KSYTQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVV
LETNLATIRALEAVQRRLSRMTAEEQVKFRLDNTMGGCSEVIHRKAIQRIYGDKAADIID
GLKRNPAVSVPIVLKRLKMKEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTK
VFRSKTLLNEIETIYDERQEQASEDTAPVPGGPHMTLTYQDSQILEDAAALIIHHVKRQV
GIQKEDKYKIKQVIHHFIPDMLFARRGELSDVEEEEDEEEEEEEDETGPDEDGSKKHNGL
AGSGGSAKSKLLFGNTGAQKLRGLDDVYNLYYVNNNWYIFQRLHQILCLRLLRIYGQAER
QIEEDCREREWEREVLGVKRDKSENPAVQLRLKEPMDIEVEDYYSAFLEMVRNLLDGNME
PTQYEDSLREMFTIHAYTAFTMDKLIQSIVRQLQHIVSDELCVRVTDLYLSQSTNKATGG
ALSTQASRATAEGAYQRKAEQLMSDENCFKLMFVKSQGSVTLTLELLDTEEENSDEPAET
ERWCDYVGRYLNSDSASPELREHLAQKPVFLPRNLRRIRKCQRGWEQLQQAKAATGTSEK
SHSAEDLKMECMFKLNSYKMVYVFKSEDYMYRRTALTRAHQSHQRVHTRLHRRFQGLVDT
WAKEHVTSDMATDTRKWLMGERREGLLPCTTTRDPQVLYYLKINRYHVTYHGSSSGAP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
ttctggaatgtgatctgcaggaaattcccagagctgttctcctggttcaaaaacttcctg
ggctacagagagtccagccacatcgagagctttcccaaggagaggaccacagagggcatg
gccatggagatagactacgcttcctgtaagaggttgggctccagctacagggcgctaccc
aagagctacacacagcccaagtgtacagggaggaccccactgtgtaaagaggtcctgaat
gacacgtgggtgtcgttcccttcgtggtcagaggattccacctttgtcagctccaagaag
acccagtatgaggagcatatttacagatgtgaggacgagcgcttcgagctggacgtggtg
ctggagacaaacctggccaccataagagctctggaggccgtacagaggaggctgtcgcgc
atgacggccgaggaacaggtcaagttccggctggacaacaccatgggcggctgctccgag
gtcatccaccgcaaggccatccagaggatatacggcgacaaggctgccgacatcatcgac
gggctcaagaggaacccggctgtgtccgtccctatagtactcaagaggttaaagatgaaa
gaagaagaatggagggaagcccagagaggattcaacaagatctggagggagcagaatgag
aagtattacctcaagtccctcgaccaccaaggcatcaacttcaagcagaatgacaccaag
gtgttccgctcaaagaccttgctcaatgagattgagaccatatacgatgagcgacaggaa
caggcttccgaggacacggcccccgtgcctggcgggccccacatgaccctgacctaccag
gacagccagatcctggaggacgccgccgcgctcatcatccaccacgtcaagaggcaggtc
ggcatccagaaggaggacaagtacaagatcaaacaggtcatccaccactttatcccagac
atgctgttcgcccggcgcggggagctgtcggatgtggaggaagaggaagacgaggaggag
gaggaggaagaagacgaaaccgggccagatgaagacgggtcaaagaagcacaacgggttg
gctggcagtggtggctccgctaagtctaagctgttattcggcaacacgggggcacagaaa
ctgcgtggcctagacgacgtctacaacctctactacgtcaacaacaactggtacatcttc
cagcgcctgcatcagatcctctgtttgcggttgttgcgcatctacgggcaggcagagagg
cagatcgaggaggactgcagggaacgggagtgggagagggaggtgctgggtgtcaaacgg
gataagagtgagaatcctgccgtccagctgagactaaaggagcccatggacattgaagtg
gaggactactactctgccttcctggagatggtgcggaacctcctggacggtaacatggag
cccacccagtacgaggactccctcagggagatgttcaccatccacgcctacactgccttc
accatggacaagctcatccagagcattgtcagacagctccagcacattgtgagtgatgag
ctctgcgtgcgcgtgacagacctctacctgagccagagcaccaacaaggccaccggcggc
gccctgtccacccaggcctccagagcgaccgccgagggggcataccagcgcaaggcggag
cagctcatgtccgacgagaactgcttcaagctgatgtttgtgaagagccaaggcagcgtg
accctgaccctggagctgcttgacacggaggaggagaactcagacgaacccgctgagaca
gagcggtggtgcgactacgtgggacgctacctgaactcggactcagcgtctccagagctg
cgcgagcacctggcccaaaagcctgtgttcctccccaggaacctccggcggatccggaag
tgccagagagggtgggagcagctgcagcaggcgaaggcggctacggggacgtcagagaag
tcccacagcgctgaggacctgaagatggagtgcatgttcaaactcaactcgtacaagatg
gtgtacgtcttcaagtcggaggactacatgtacagacgcactgcgttgacccgggctcat
cagtcccaccagagagtccacactcgcctgcaccgccgcttccaaggcttggtggacacc
tgggccaaggaacacgtgaccagcgacatggccaccgacacccgcaagtggctgatggga
gagcgtcgcgagggtctgttgccgtgcaccaccacccgggatccccaggtcctctattac
ctgaaaatcaacagataccatgtgacgtatcatggcagctcgtcaggggcaccttag
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integrated database retrieval system
