Oncorhynchus nerka (sockeye salmon): 115127994
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Entry
115127994 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115127994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115127994
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115127994
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115127994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
115127994
NCBI-ProteinID:
XP_029513470
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MADVPVPPSSLRTEGILLREIHVNLLECKVCFEKYNPRQKERRPQNLSCGHVLCLECVRA
LSHPVLKKLECPFCRQLCDVDSTSHCQALTDLQDLLLSRSPRSPVPHRVRGGSGWVGGLG
SGALRLRSAFGGWGSLINPTGVAVFGSSGTVVVVHDGERRVVVFGPQGRRLHGFGRRGRG
HGEVCHPVDVAVTPSGYVVVTDAGDAAVKVFTTRGSYVLAVWDSFQMPWGVDVDSCGHIL
VTDIQAGTLSQVVVDFARGVTLMNRVVITDLQRPKAVACCRVTGNIALVETLGLTTTQPP
NGPRPTRLTIFNKDFNVLSQIDSFTLSLGASVWPCMSAVAFDRDGDVIVIDSQRGLIWSL
GKLQNSPVLTPLVSGDLVRPVGLVATAQNTLIVLDSGDHAVKMYSVHSDAILVQK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttcctgttcctccttcctcactgagaacagaggggatcctcctgagagag
atccacgtcaacctgctggagtgtaaagtctgcttcgagaagtataacccacggcagaag
gaacgccggcctcagaacctgtcctgcggccatgtactctgtctggaatgtgtccgggcg
ctctcccaccccgtcctcaagaaacttgagtgccctttctgccggcagctgtgtgacgtt
gacagcacctcccactgccaggcgctgacagacctccaggatcttctgctctcccgctcc
cccaggtcacctgtccctcatcgggtcagaggaggcagcggctgggtcggaggcctgggc
tctggagctctgcggcttcgctcagccttcgggggctggggatccctgatcaaccccacg
ggggtggctgtgttcgggtcctctgggaccgtggtggtggtgcacgatggagaaaggagg
gtggtggtattcgggcctcagggcaggcggctgcacgggttcgggcggaggggtcgcggc
cacggggaggtgtgtcacccggtggatgtggcggtgactcccagcgggtatgtggttgtg
acggatgccggtgacgctgcagtgaaagtgttcaccaccagggggagttatgttctggcg
gtgtgggactccttccagatgccctggggggtggacgtggacagctgtggacatatcctg
gtcactgacatccaggccggcacgctctcccaggttgtggtggactttgctcgtggcgtg
actctgatgaaccgagtggtcataaccgacctccagcggcccaaggcagtggcctgctgt
cgggtgacggggaacatcgccctggtggagacactggggctcaccaccacacaacctcca
aatggcccccggcctaccagactgacaatattcaacaaagactttaacgtgctctctcag
atagacagctttactctgagcctgggggcctccgtgtggccctgcatgtctgccgtggcc
tttgacagggacggggatgtgatcgtgatagactcccagcgtgggttgatttggagtttg
ggaaagctccagaacagcccggtcctaacccccctagtcagtggagacttggttcgcccg
gtggggctggtcgccacagcacagaacacgctgattgttttagacagtggagaccatgca
gtgaagatgtattcagttcactcggatgctattctagtccaaaaatga
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