Oncorhynchus nerka (sockeye salmon): 115128098
Help
Entry
115128098 CDS
T07952
Name
(RefSeq) calmodulin-regulated spectrin-associated protein 1-B-like isoform X1
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115128098
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115128098
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115128098
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115128098
Intermediate filaments
Intermediate filament-binding proteins
115128098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
CAMSAP_CC1
CH
Motif
Other DBs
NCBI-GeneID:
115128098
NCBI-ProteinID:
XP_029513566
LinkDB
All DBs
Position
LG4:complement(35400793..35508972)
Genome browser
AA seq
1643 aa
AA seq
DB search
MDLDVCAGGNSTKGKADSAHAGEGGAMATVPLELYDSARAKIDANLRWLLAKAYGIDHIP
EDLCDPFYTDQYEQEHIKPPVIRLLLSGELYCRVCGLILKGEQASALQSHLSVIQALSRK
GIYVLESDNNPVSDGDLDCSPIKMSSHIPLIDSLMMAYTVEMISIEQVVGCVKRFSTFSA
SKELPFDLEDAMVFWINKVNMKMKEITEKETKIKQHLLESPSHQKVRYRRDNLSGRQLQH
FPMLDDLMKDMCDGAALLSVVHFYCPECMRLEDICLKVVSSIADSLYNIQLLREFCNEYL
NRSFHLRPEDVLYAPPVLKHNVMVFIAELFWWFEILKPDFVQPRDVQEVKDVRSLLQPKD
SRPHVSISNATKRSFLATPGSPDIITTSQSPDIYNSTKVSPASSPSHVLLPLRQRQQKSI
QKNDASGQRNRSNSLSRVDSQVLESSLAWPERRQRPLSQPVPYALHFPLERECDGLSLAH
SISKDSLGSNIISITPKHMPGGPGMGVQLPPHRLNGQDMMGHIRFKEIEEEELVAIIHPA
ALARCYGPRASPESDEMEQDDLEVQSEVTSRVSSARHTYCLAAPHPDPQAESFYLEPLMP
AVFKTAKEKSISLNKEDESGESTSKGVLKRTTEGLNCTFTPIPNVEATFGPFRPPTKGGT
GSSQLPLMGAAEPITKDQSCGFFLHLSPEPGDQTTTFLGLAPSYSPFPTAITTAWVGRDS
YSEIANLEEEEEEDQMELAKEVVRRVMGKCLGEGGESKGEPEGGEGESAKLREDMKVCER
EDKEGLEAWSGPSSPCLSTPSWASSVCNSGTMRMTSFAERKLHRKVNSFPDDCSNNSSSQ
KTTPDGSESAPYTLGGLWCLQAPSPCRLAKDGALRVRKEVGTTNVLASELVQLHMQLEEQ
RRSIEHQKKKMETISACQRLKLGKAAFLNIVKKGGGKNNTLPQPLKHLETQYQTAGKDKA
CRDDSCLDVLKGQRKVGQQQRDRDNRTNNGGAGPPDEAGVEPDLSECSRSIELLNEAIGA
IQQQMMQLSLQQDRLIKQSVQSPLGVPHAASLLSLPSAPTPTQDTSSIPSSDSTVTPTAH
SDSTATPTDSKFRPAVRFMETITTAPPTRRPPKLSSGCSPRTKPAELKPTKENGRPASKT
GTPASNTDPRRSPGWHTTSRGEQDRDQSQNSSPTCVIFTESPRALERGTLRSTTFKIRDE
ANQRSHRDGPTLNPKHTPPKDSTPYGTPLTPHCVDVAEGRERSGSGKEIEPGEEGGRGKG
QLIEVDLSDLKEPSEGKDSDIGDTSADGEQKSGLGFFFKDDEKMAEDERAKRRAHFLLKQ
QRKMEEARLRKLQTEAESEQKRDEARRKAEEDRVRKEEEKVRRELIKQEYLRRKQQELIE
EQGLVKPRCKARKTRPKSLHRGESCSDTGFSKGSSTRYSLRASMLMRAQGSAAGSRGEDI
LHCFQSGSTLSLATETESVTFGGAKPQRRGSVESFPLLSMNSSRNMERDWENGSTASSIT
STVEYNGPKLFKECVSKSNKPIIHNAITHCCLAGKVNEAQKNTILEELERCEANHLMILF
RDGSCQFRAIYSFSPDTEEIVKFTGMGPRSISRKMIDKLYKYSSDRKQFNCIPAKTVSVS
VDALTIHNHLWQIKRPSGSSRKN
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggatttagacgtgtgtgcaggcgggaacagtaccaagggaaaagctgattcggctcat
gctggtgaaggaggcgctatggcgaccgtgcctctggagctctatgactccgctagagcg
aaaatagatgcaaatctccgctggctgttagccaaagcttacggtatagaccacatccca
gaagatctatgtgaccccttctacacggaccagtatgagcaggagcacatcaagccgccc
gtcatcagactgctgctgtccggggagctgtactgccgtgtctgcggcctcatcctgaag
ggcgagcaggcctcagcgctccagtcccacctgtccgtcatccaggccctctcccggaaa
ggcatctacgtcctggagagcgacaacaacccagtctctgacggtgacctggactgtagc
cccatcaagatgagttcccacataccattaattgattccctgatgatggcctacacagtg
gagatgatcagcatagagcaggtggtaggctgcgtcaaacgcttctccaccttcagcgcc
tccaaggagctgccctttgacctggaggacgccatggtcttctggatcaacaaggtgaat
atgaagatgaaggagatcacagagaaagagaccaaaatcaagcagcatctgctagagtcc
cccagccaccaaaaggtgcgataccgtagagacaacctctctggccggcagctccagcac
ttccccatgctggatgacctcatgaaggacatgtgtgatggtgccgctctgctgtcagtg
gtgcacttctactgccccgaatgtatgaggctagaggatatttgcctgaaagtggtgtcc
tccatagcagacagcctgtacaacatccagctcttgagggagttttgtaatgagtacctg
aaccgaagcttccacctgcgtccagaagatgtgctgtatgctcccccagtgctgaagcac
aatgtcatggtgttcatcgcagagctattctggtggtttgagatcctcaagcccgacttt
gtccagccccgggacgtgcaagaagtcaaagacgtgaggtcactgctgcagcccaaggat
tcccgtccccatgtctccatctccaatgctaccaaacgcagcttcctggccacacctggc
tctcctgacatcataacaacgtcccaaagcccagatatctataacagtaccaaagtcagt
cctgcgtctagcccctcacacgtattactccccctgagacagaggcaacagaagtccata
cagaagaatgacgcctcagggcagagaaacaggtccaactctctgtcacgtgtggacagt
caagttctggagtcaagcctggcctggccagagaggagacagagacccctttcccagccg
gtgccctacgccctccacttccccctggagagagagtgcgatggcctgagcctggcccac
tccatcagcaaggacagcctgggatccaacatcatcagcatcacacccaaacacatgcct
ggtgggccggggatgggtgtacaactgcccccccacaggctcaacggtcaggacatgatg
ggccacatccgcttcaaggagatagaggaggaagagctggtggccatcatccacccggcg
gctctggccaggtgctacggcccccgtgcctcccccgagagtgacgaaatggagcaggac
gacctggaggtccagagtgaggtgacctccagagtgtccagtgctcgtcacacctactgc
ctcgctgcccctcaccccgacccccaggctgagagtttctacctggagcccctgatgcca
gccgtttttaagaccgccaaagagaagagcatcagcctgaacaaggaagatgaaagcggg
gagagtacaagcaaaggggtccttaagagaaccactgagggtcttaattgcacgttcacc
cccatccccaatgtggaggccacctttggtcccttcagaccacccacgaaggggggtacg
ggttcttctcagctccctctgatgggggcagcagagcccatcaccaaggatcagtcttgt
ggcttcttcctccacctgtcaccggagcccggggaccagacgacgaccttcttggggcta
gcaccgagctacagccccttccccaccgccattactacagcttgggtgggccgggactca
tactctgagattgcaaacctggaagaggaggaggaggaggatcagatggagctggccaag
gaagtggtgaggagggtcatggggaagtgcctgggagagggaggggagagcaaaggggaa
ccggaggggggcgagggcgagtcggccaagctccgggaggacatgaaggtgtgcgagcgc
gaggacaaggaaggcctggaagcctggagcggaccgtccagcccttgccttagcacgccg
tcctgggccagcagtgtgtgcaacagcggcaccatgcgaatgaccagctttgcagagcgc
aagctccaccgaaaggtcaacagctttcccgacgactgctccaataacagcagctcccaa
aagaccacacccgatggctcggagagcgccccctacactctaggaggcttgtggtgcctg
caggctcctagcccatgtcggctggctaaagacggcgctttgcgggtcagaaaggaggtt
ggcaccaccaacgtcctggcctcagagctggtgcagctccacatgcagctggaggagcag
cggcggtccatagagcaccaaaagaagaagatggagaccatatcggcgtgccagcgactc
aagctgggcaaggctgccttcctcaacattgtcaagaaggggggtggcaagaacaacacg
ctgccccagcccctcaaacacctggagacccaatatcagacggccggcaaggacaaggct
tgcagggacgactcgtgtttggatgtcctgaagggtcagaggaaggtgggacagcagcag
agggacagggacaacagaacaaacaatggcggtgcagggccgccggacgaggcgggggtc
gagccagacctgagcgagtgtagccgctccatagagttgctgaatgaagccatcggtgcc
attcagcaacagatgatgcagctgtctctacagcaggaccgtctgataaagcagagcgtc
cagtcacccctaggggtcccgcatgccgcctcccttctatccctgccatcagcccctaca
cccacccaagacacctcttcaattccttcctcagactccaccgttacccccaccgctcac
tcagactccaccgctacccccaccgactccaaattccgcccggccgtgcgtttcatggag
accatcaccaccgctccacccacccgccgccctcccaaactgagctccggatgcagcccc
aggaccaaacccgcagaactcaaaccgaccaaggagaatggcaggccggcttccaagacc
ggcacccctgcatccaacacagaccctaggcgctccccggggtggcacaccacctcccgt
ggggagcaggatagggaccagagtcagaacagcagccccacctgcgtgatattcacagag
agcccaagggccttggagagaggcacgctccgtagcaccaccttcaagatcagagatgag
gccaaccagcgcagccacagagacgggcccacccttaaccctaagcataccccccctaag
gattcaaccccctatggcacccctctcacaccccactgtgtggacgtggctgagggccgg
gagcgtagcggctcagggaaggagatcgagcccggcgaggagggaggtcgagggaaaggc
cagctgatcgaggtagacctgtctgacctgaaggaaccatcggagggaaaagactccgat
ataggggacacctcggcagacggagaacagaagtcaggactgggtttcttcttcaaggac
gatgagaagatggcagaggatgagagggcaaagcgtcgcgctcactttctcctcaaacag
cagcggaagatggaggaggcacggctccgcaaactgcagacggaggctgagagcgaacag
aaacgagacgaagccaggcgtaaggcagaagaggaccgtgtgaggaaggaggaggagaag
gtgcggagggagctgatcaagcaggagtacctgaggaggaagcagcaggagctgatagag
gagcagggtttggttaagcccaggtgtaaagccaggaagacccggcctaagtccctgcat
cgtggagagtcctgctccgacaccggcttctccaagggatcctccacacgttattctctg
agagcatccatgttgatgagagcccagggatcagcagcaggcagtagaggagaggacatt
ctccactgtttccaatcaggctccactctctccttggccaccgagacagagagtgtcact
tttggaggagccaaaccacagaggcgtgggtcggtggagtcgttccctcttctaagcatg
aactccagtaggaacatggagagagactgggagaacggctctacagcctcctccatcaca
tctacagtagagtacaatggtcccaagctgtttaaggagtgtgtttccaagtccaacaag
ccgataatccacaatgccatcacccactgctgcctggctggcaaggtcaacgaagcccag
aagaacaccatcctagaggagctggagaggtgtgaggccaaccacctgatgattctgttc
agggacggtagctgccagttccgagccatctactccttctcccccgacacagaggagatt
gtcaagttcaccggcatggggccacgcagcatcagccgcaagatgatcgacaagctctat
aagtacagctccgaccgcaagcagttcaactgcatccccgccaagaccgtgtcagtcagc
gtggatgccctgaccatacacaaccacctgtggcagatcaagaggcccagtggatcttct
aggaagaattga
DBGET
integrated database retrieval system
