Oncorhynchus nerka (sockeye salmon): 115128207
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Entry
115128207 CDS
T07952
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115128207
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115128207
Membrane trafficking [BR:
one04131
]
Protein recycling
Others
Others
115128207
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115128207
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
USP7_C2
Beta-prop_CATSPERE
DarA_N
TetR_C_26
Motif
Other DBs
NCBI-GeneID:
115128207
NCBI-ProteinID:
XP_029513715
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Position
LG4:37572915..37617471
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AA seq
564 aa
AA seq
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MADVEGDEIRSALLSASSNGPAAGSIVGTGGQNATQVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRTGERELVLSVLSVPPQEADCLEAGDESAAQLSYDYSDKQAVPISIPTFKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILNQNLKREFASYIFPKIPGKWPFSLSEQQLDARRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIALPDKTTISVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKW
LFTSQEEELLRDKPLAVHYCFHQALDDVKKGFIKTEDKSYQLTKLAEQRKMAMYLSLLRS
CEGYNEVMFPHCSCDSRRKGHVITAISMHHFKLHACTEDGTLENQVISFEWAEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQIEKEASDKDNQNCS
NNEYLPALETQKGWRHLGGEIATS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttgaaggcgatgaaattcggtcggctctcctttcagcttccagtaatgga
cccgctgcaggttcgatagtcggtaccggaggccaaaatgctacccaggtgacgtcaggt
ccacggatggttagaattgtaaagtcggaatcaggatatggattcaacgttcgtggacaa
gttagcgaaggaggacaactgcgaagcattaatggggaattgtacgcccctcttcagcat
gtcagtgctgttttgcctggaggggctgcggaccgagctggcatatcaaagggtgatagg
attcttgaggttaatggagtgagcgtggagggggccacccacaagcaggtggtggatctg
atccggaccggagagagggagctggtgctgtccgtgctgtctgtgcctccccaggaggcc
gactgcctggaggccggggatgagagtgcggcccagctcagctacgactacagtgacaag
caggccgtacccatctccatccccaccttcaagcacgtggagcagcacgcagagaggttt
gtggtgtacaacgtgtacatgtcgggcaggcagctgtgctccaagcgttaccgagagttt
gctatcctgaaccagaacctgaagagggagtttgccagctacatcttccccaagataccc
gggaagtggcccttctctctgtctgagcagcagctggacgcacgccgcaggggcctggag
gagtatctggaaagagtttgttctgtgcgggtgattggggagagtgacatcatgcaggaa
ttcctgtctgaatcagatgagaattacaatggtgtgtcagacgtggagttgcggatagcc
ctgccagacaagaccaccatctcggtcagggtgcgcaagaacagcacgactgaccaagtc
taccaggctttagtgatgaaggttggtatggacagcatcatggccagctactttgccctc
tttgaagtcatcaaccactcctttgtgagaaaactggcccccaatgagttcccccacaag
ttgtacgtgcagaactacacatcggccgtgccgggtacctgtctggccctccgcaagtgg
ctcttcacctctcaggaggaggagctgctcagggacaaacctctggccgttcactactgc
ttccaccaggcattggatgacgtgaagaagggattcatcaaaacagaagacaagtcttac
cagctgacaaaactggcagagcagcgcaagatggccatgtatctgagtctgctgcgctcc
tgtgagggatacaatgaggtcatgttcccccactgctcctgtgactcccggaggaagggc
cacgtcatcacggccatcagcatgcaccacttcaagctgcacgcctgcacagaggatggc
acgcttgagaaccaggtgatatcatttgagtgggcggagatgcagcgctgggacaccgat
gaggagggcatggcgttctgctttgagtacgccaggggggagaagaaacctcgctgggtc
aagatcttcacaccatacttcaactacatgcacgagtgcttcgagagggtcttctgtgag
ctcaagtggaggaaacagattgaaaaagaggcctctgacaaagacaaccagaactgcagt
aacaatgaatatctccctgctctggagacacagaagggatggcgccatctagggggcgag
atcgccacatcctaa
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integrated database retrieval system