KEGG   Oncorhynchus nerka (sockeye salmon): 115128207
Entry
115128207         CDS       T07952                                 
Name
(RefSeq) sorting nexin-27-like isoform X1
  KO
K17936  sorting nexin-27
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115128207
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:one04990]
    115128207
Membrane trafficking [BR:one04131]
 Protein recycling
  Others
   Others
    115128207
Domain-containing proteins not elsewhere classified [BR:one04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   115128207
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 SNX17-27-31_F1_FERM RA_2 PDZ_2 SNX17_FERM_C USP7_C2 Beta-prop_CATSPERE DarA_N TetR_C_26
Other DBs
NCBI-GeneID: 115128207
NCBI-ProteinID: XP_029513715
LinkDB
Position
LG4:37572915..37617471
AA seq 564 aa
MADVEGDEIRSALLSASSNGPAAGSIVGTGGQNATQVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRTGERELVLSVLSVPPQEADCLEAGDESAAQLSYDYSDKQAVPISIPTFKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILNQNLKREFASYIFPKIPGKWPFSLSEQQLDARRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIALPDKTTISVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKW
LFTSQEEELLRDKPLAVHYCFHQALDDVKKGFIKTEDKSYQLTKLAEQRKMAMYLSLLRS
CEGYNEVMFPHCSCDSRRKGHVITAISMHHFKLHACTEDGTLENQVISFEWAEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQIEKEASDKDNQNCS
NNEYLPALETQKGWRHLGGEIATS
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggcggatgttgaaggcgatgaaattcggtcggctctcctttcagcttccagtaatgga
cccgctgcaggttcgatagtcggtaccggaggccaaaatgctacccaggtgacgtcaggt
ccacggatggttagaattgtaaagtcggaatcaggatatggattcaacgttcgtggacaa
gttagcgaaggaggacaactgcgaagcattaatggggaattgtacgcccctcttcagcat
gtcagtgctgttttgcctggaggggctgcggaccgagctggcatatcaaagggtgatagg
attcttgaggttaatggagtgagcgtggagggggccacccacaagcaggtggtggatctg
atccggaccggagagagggagctggtgctgtccgtgctgtctgtgcctccccaggaggcc
gactgcctggaggccggggatgagagtgcggcccagctcagctacgactacagtgacaag
caggccgtacccatctccatccccaccttcaagcacgtggagcagcacgcagagaggttt
gtggtgtacaacgtgtacatgtcgggcaggcagctgtgctccaagcgttaccgagagttt
gctatcctgaaccagaacctgaagagggagtttgccagctacatcttccccaagataccc
gggaagtggcccttctctctgtctgagcagcagctggacgcacgccgcaggggcctggag
gagtatctggaaagagtttgttctgtgcgggtgattggggagagtgacatcatgcaggaa
ttcctgtctgaatcagatgagaattacaatggtgtgtcagacgtggagttgcggatagcc
ctgccagacaagaccaccatctcggtcagggtgcgcaagaacagcacgactgaccaagtc
taccaggctttagtgatgaaggttggtatggacagcatcatggccagctactttgccctc
tttgaagtcatcaaccactcctttgtgagaaaactggcccccaatgagttcccccacaag
ttgtacgtgcagaactacacatcggccgtgccgggtacctgtctggccctccgcaagtgg
ctcttcacctctcaggaggaggagctgctcagggacaaacctctggccgttcactactgc
ttccaccaggcattggatgacgtgaagaagggattcatcaaaacagaagacaagtcttac
cagctgacaaaactggcagagcagcgcaagatggccatgtatctgagtctgctgcgctcc
tgtgagggatacaatgaggtcatgttcccccactgctcctgtgactcccggaggaagggc
cacgtcatcacggccatcagcatgcaccacttcaagctgcacgcctgcacagaggatggc
acgcttgagaaccaggtgatatcatttgagtgggcggagatgcagcgctgggacaccgat
gaggagggcatggcgttctgctttgagtacgccaggggggagaagaaacctcgctgggtc
aagatcttcacaccatacttcaactacatgcacgagtgcttcgagagggtcttctgtgag
ctcaagtggaggaaacagattgaaaaagaggcctctgacaaagacaaccagaactgcagt
aacaatgaatatctccctgctctggagacacagaagggatggcgccatctagggggcgag
atcgccacatcctaa

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