KEGG T07952: 115128211

Oncorhynchus nerka (sockeye salmon): 115128211

Entry

115128211         CDS       T07952

Name

(RefSeq) E3 ubiquitin-protein ligase RNF115-like

K11982

E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]

Organism

one Oncorhynchus nerka (sockeye salmon)

Brite

KEGG Orthology (KO) [BR:one00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115128211
   04121 Ubiquitin system [BR:one04121]
    115128211
Enzymes [BR:one01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115128211
Membrane trafficking [BR:one04131]
Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    115128211
Ubiquitin system [BR:one04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115128211

SSDB

Motif

Pfam:

zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-rbx1 zf-RING_UBOX Zn_ribbon_19 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 HypA C1_2 zf-HC5HC2H Rad50_zn_hook

Other DBs

NCBI-GeneID:

115128211

NCBI-ProteinID:

XP_029513726

LinkDB

Position

LG4:complement(37764605..37771192)

AA seq 301 aa
MAEAAAAPQNRFFCHCCKGEIDPKLPEFTCPRCESDFIEEVTEDSSLLENSTTAEANDDA
GTLFSELWQLLFMEHSALLSDPSTSESDQSHLQAAAVEGDVEGPSEVPVSSVGGTDPLVP
EPERPSRPPSQGRRQSHTPAVEGIVQQFLAGLFANNGNPGIAPAALSGMLHSNPGDYAWG
QGGLDAVITELLGQFEGTGPPPAEKEMISSLPTVNVSQEQTDSRLECPVCREEYSMGESV
KQLPCLHYFHSDCIVPWLELHDTCPVCRKSLDGVDQSIQPPPEPPETLSIRTDPQEERQA
I

NT seq 906 nt +upstreamnt +downstreamnt
atggcggaggctgcggcggcaccacaaaaccgttttttctgtcactgttgtaaaggtgaa
atcgaccctaaactcccggaattcacatgccccaggtgtgagtccgatttcattgaggag
gtgacagaagactccagtctcttggagaacagcaccactgcagaggccaatgatgatgca
ggcacactcttttcagagctgtggcagctgctgtttatggaacactctgctcttctctcg
gacccctccacctctgagtctgaccagagccatctacaggctgccgcagtggagggagac
gtagagggcccttctgaagtgcctgtgtcctcggtgggaggcacagatcctttagtgcct
gaaccggaacgcccctctcgtccgcctagccaggggaggcgacagtcccacacgccagca
gtggagggtattgtgcagcagtttttggctggtctgtttgccaacaatggaaatccaggc
atcgcaccagctgcactgtctggcatgctccattcaaatccaggggactatgcctggggt
cagggaggtctagacgcagttatcacagagttgttaggtcagtttgagggcacaggtcca
cctcctgcagagaaggagatgatctcatccctccccacagtcaacgtctctcaagaacag
acagatagcagactggagtgtccagtatgtagggaggagtactccatgggagagtctgtc
aaacagctgccctgcctccattatttccacagtgactgcatagtgccatggcttgaactg
cacgatacctgtcctgtgtgtcgtaaaagtcttgacggcgtcgaccagagcatccagccc
ccaccagaacccccagagaccctctccatcaggacagaccctcaggaggagagacaggct
atttga

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