Oncorhynchus nerka (sockeye salmon): 115128250
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Entry
115128250 CDS
T07952
Symbol
lrp12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115128250 (lrp12)
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115128250 (lrp12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
115128250
NCBI-ProteinID:
XP_029513795
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Position
LG4:complement(39772810..39809564)
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AA seq
886 aa
AA seq
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MAYYTLSSNGISSSSWISLHMVLLIFTGIAVCSQHNENVYVSGISNACGDVAEQIRASSG
VITSPGWPFQYPSRINCSWNIRANPGEIITISFQDFEIQSSHRCGLDWISISTYKNLDGY
RACGSSIPAPYISSQDHVWIKFHSDDIMTGKGFRLSYITGKLEMISCDLDQFHCSNGKCI
PESWKCNTMDECGDNSDEELCVQPNPSAAFSFQPCAFNQFPCLSRYTRVYTCLHESLKCD
GSIDCQDLGDEIDCDVPTCGEWLRNFYGTFSSPNYPDFYPPGSNCTWLIDTGDHRKVILR
FMDFKLDGTGYGDYVKVYDGLEENPRRLLRVLTAFDSRAPMAVVSSSGQLRVHFYADKIN
AARGFNVTYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDEVNCSTCQEDEFPC
SRNGACYPRSDRCNYQNRCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDAQDDCGDGS
DEESCPVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAEL
LRREAPPSYGQLIAQGLIPPVEDFPVCSGNQASVLENLRLAVRSQLGFTSIHLPTSGRHS
NIWQRLFNFTRSRRSGSLALVSADGEDNSTSSGNGGCSAHEPDRAGPHRGLLPLDSDDTD
TESERRDVPGAVGGLVAPLPVKTPPATAVEAIVSVSTNSTTPAPLPSRRDSHRARASPAV
VEAHTMETPGGEASEPQCTATGRSQLSSALSRVTRSLHWVRFSLGRSGGSSGGGTQNHSP
LRHLEHGAGTREDEDDVELLIPVSDAASDTDSTSETSRLLSLEVGLDQAAPRLSSPASLR
SGRVSLGRNGPCEHCSMVHTAQIPDACLEATGKTETNSDDELLLLC
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcctactacactttgagctcaaatgggatttcatcttcatcatggatctctctacac
atggtcctcctcatattcactggaattgcagtttgctcccagcacaacgagaacgtttac
gtatcggggatttctaatgcctgtggagatgttgcagagcagatcagggcgtccagtgga
gtgatcaccagccctggctggcccttccagtacccctccaggatcaactgcagctggaac
atcagggctaaccctggggaaatcatcaccatcagtttccaggactttgagatccagagc
tcccaccgttgtggcctggactggatctccattagcacctacaagaacctggacggctac
cgggcatgtggctcatccatcccagccccttacatttcctcccaggaccacgtgtggatt
aagttccactcagacgatatcatgactggcaagggcttcaggctgtcttatataacagga
aaattggagatgatcagctgcgacttggaccagttccactgctccaacggaaagtgcatc
ccggagtcgtggaagtgcaacaccatggacgagtgtggtgacaactctgacgaggagctg
tgcgtccagcccaacccctcggcagcattctccttccagccctgtgccttcaaccagttt
ccctgcctttcccgctacacccgcgtctacacctgcctgcacgagtcgctcaaatgcgat
ggcagcatcgactgccaggaccttggtgacgagatcgactgtgacgtgcctacctgcggc
gagtggctgcggaacttctacggcaccttcagctcacccaactaccctgacttctaccca
ccaggcagcaactgcacctggcttatcgacacaggcgaccaccgcaaggtgatcctgcgt
ttcatggacttcaagctggacgggacgggctatggggactacgtcaaggtgtacgacggc
ttggaagagaaccctcgccgtctactccgcgtcctcacagccttcgactcccgtgccccc
atggccgtggtctcgtcctcgggccagctgcgcgttcacttctatgctgacaagatcaat
gcggcaaggggcttcaatgtcacctaccaggtggacggtttctgtctgccctgggagatc
ccgtgtgggggcaactggggctgctacacggagcagcagcgctgcgacggttactggcac
tgccccaatggtcgcgacgaagtcaactgcagcacctgccaggaggatgagttcccctgc
tccaggaacggcgcctgctacccgcgctcggaccgctgcaactaccagaaccgctgcccc
aacggctcggacgagaagaactgcttcttctgccagcctggcaacttccactgcaagaac
aaccgctgtgtgttcgagagctgggtgtgcgacgcgcaggacgactgcggcgacgggagc
gacgaggagagttgtccggtcatcgtgcccacacgggtcatcacggcggcggttatagga
agtctcatctgtggcctgctgctggtcatcgctctgggctgcacctgcaaactctactcc
ctccggatgtttgagcgcaggtcatttgagacccagctgtccagagttgaggctgagctc
ctgaggagggaggctcctccgtcgtatggccagctgatcgcccagggccttatacccccg
gtggaggacttccctgtctgctccggcaaccaggcgtctgtgttggagaacctgaggttg
gctgttcgctcccagttgggtttcacctccatccacctgcccacctccggtcgccacagc
aacatctggcaacgcctcttcaacttcacacgctcacggcgctccggctcactggccctg
gtgtctgctgacggcgaggacaacagcaccagcagcggtaacggtggctgctcggcccac
gaacccgacagggctggaccccaccgtgggttgctgcccctcgactcggacgacacagat
acagagagcgagcgccgggatgtccctggggctgtgggggggcttgtagcccccctcccc
gtaaagacccctccggcaactgcagtggaggccatcgtctcggtgtcgacaaactccacc
actcccgcccctctgcccagccgtagggacagccaccgggctagggccagcccagcagtg
gtggaggcacacaccatggagaccccagggggagaggcatcagagcctcagtgtactgcg
accgggaggagccagctgagcagtgccctgagccgggtcacccgcagcctgcactgggta
cgtttctccctgggccgctccggaggctcctcgggtgggggaacccagaaccacagccct
ctgaggcacctagagcatggagcagggaccagggaggacgaagacgacgtggagctgctt
atccctgtatcggatgctgcctcggacactgactccaccagcgagacctccaggctcctc
agcttggaggtaggtctagatcaggctgccccccgcctatcatccccagcctctctcagg
tcaggccgggtgtccctgggccggaacgggccctgtgaacactgtagcatggttcacacc
gcacagatcccagacgcctgtctggaggccacaggcaagacggagaccaatagtgatgac
gagttacttctgctctgctaa
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